RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SNF8Q96H20 258 aa26.81■■□□□ 1.88
SCAMP4-210ENST00000588555 PPARGC1AQ9UBK2 798 aaKnown RBP26.81■■□□□ 1.88
SCAMP4-210ENST00000588555 DOCK6Q96HP0 2047 aa26.81■■□□□ 1.88
SCAMP4-210ENST00000588555 HACD1B0YJ81 288 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 KLKB1P03952 638 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 HNRNPA1P09651 372 aaKnown RBP eCLIP26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 ADCY8P40145 1251 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 NRLP54845 237 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 RAP1GAP2Q684P5 730 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 PDZD4Q76G19 769 aaPredicted RBP26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 FBXO25Q8TCJ0 367 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 ART4Q93070 314 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 CATSPERBQ9H7T0 1116 aa26.8■■□□□ 1.88
SCAMP4-210ENST00000588555 A0A1W2PRU2 124 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 SERPINB6P35237 376 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 CCR2P41597 374 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 HARS2P49590 506 aaKnown RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 IRAK1P51617 712 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 PDK1Q15118 436 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 PRKD1Q15139 912 aaPredicted RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 FBXL22Q6P050 247 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 NLRP14Q86W24 1093 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 TDHQ8IZJ6 230 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 ARL14EPQ8N8R7 260 aaPredicted RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 WBP2Q969T9 261 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 AZIN2Q96A70 460 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 LGMNQ99538 433 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 PRDM12Q9H4Q4 367 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 MPP6Q9NZW5 540 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 WASH4PA8MWX3 477 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 KCNN4O15554 427 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 ACSL4O60488 711 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 MBL2P11226 248 aaPredicted RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 MYL4P12829 197 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 ITIH2P19823 946 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 PLTPP55058 493 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 FAM133BQ5BKY9 247 aaKnown RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 RTL3Q8N8U3 475 aaKnown RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 TFB1MQ8WVM0 346 aaKnown RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 CAVIN3Q969G5 261 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 IGSF8Q969P0 613 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 FAM129AQ9BZQ8 928 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 ATXN3LQ9H3M9 355 aa26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 DNMT3BQ9UBC3 853 aaKnown RBP26.79■■□□□ 1.88
SCAMP4-210ENST00000588555 CLUHO75153 1309 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 GOLGA6L7A0A1B0GV03 622 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 DRGXA6NNA5 263 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 VAV1P15498 845 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 PTPN2P17706 415 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 HDCP19113 662 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 RPL22P35268 128 aaKnown RBP26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 ZXDBP98169 803 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 GALNT2Q10471 571 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 GPS1Q13098 491 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 P3H1Q32P28 736 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 LRRC31Q6UY01 552 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 CHSY1Q86X52 802 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 ADAMTS19Q8TE59 1207 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 MYEOVQ96EZ4 313 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 GDAP1L1Q96MZ0 367 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 ADAM7Q9H2U9 754 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 NDFIP2Q9NV92 336 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 SMPD4Q9NXE4 827 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 ZDHHC7Q9NXF8 308 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 DPP7Q9UHL4 492 aa26.78■■□□□ 1.88
SCAMP4-210ENST00000588555 NOTCH4Q99466 2003 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 NCAM2O15394 837 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 POU2F2P09086 479 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 GJA1P17302 382 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 TACR2P21452 398 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 CORO1AP31146 461 aaKnown RBP26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 CALCOCO2Q13137 446 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 DUSP6Q16828 381 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 STXBP5Q5T5C0 1151 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 RHBDF2Q6PJF5 856 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 DENND1CQ8IV53 801 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 ARHGAP12Q8IWW6 846 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 GCNAQ96QF7 691 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 ZYG11BQ9C0D3 744 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 NUP205Q92621 2012 aa26.77■■□□□ 1.88
SCAMP4-210ENST00000588555 PPP1R12AO14974 1030 aaPredicted RBP26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 GREM1O60565 184 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 RHOQP17081 205 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 SLC6A4P31645 630 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 SLC11A2P49281 568 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 C5orf22Q49AR2 442 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 LZTR1Q8N653 840 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 MAB21L3Q8N8X9 362 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 SHKBP1Q8TBC3 707 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 ZNF707Q96C28 371 aaPredicted RBP26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 TLE6Q9H808 572 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 ZNF212Q9UDV6 495 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 CPQQ9Y646 472 aa26.76■■□□□ 1.88
SCAMP4-210ENST00000588555 DNALI1O14645 258 aaPredicted RBP26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 MOSPD3O75425 235 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 CNTN5O94779 1100 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 FGF19O95750 216 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 IRF1P10914 325 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 ITGA8P53708 1063 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 SLC7A9P82251 487 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms