RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 MYO19Q96H55 970 aa10.85□□□□□ -0.67
TPM4-209ENST00000588483 PCDHB18PQ96TA0 734 aa10.85□□□□□ -0.67
TPM4-209ENST00000588483 EDEM3Q9BZQ6 932 aa10.85□□□□□ -0.67
TPM4-209ENST00000588483 CIPCQ9C0C6 399 aa10.85□□□□□ -0.67
TPM4-209ENST00000588483 TTYH3Q9C0H2 523 aa10.85□□□□□ -0.67
TPM4-209ENST00000588483 MKRN2Q9H000 416 aaKnown RBP10.85□□□□□ -0.67
TPM4-209ENST00000588483 USP36Q9P275 1121 aaKnown RBP10.85□□□□□ -0.67
TPM4-209ENST00000588483 BCCIPQ9P287 314 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM4-209ENST00000588483 MBD1Q9UIS9 605 aaPredicted RBP10.85□□□□□ -0.67
TPM4-209ENST00000588483 INTS6Q9UL03 887 aaKnown RBP10.85□□□□□ -0.67
TPM4-209ENST00000588483 PAXBP1Q9Y5B6 917 aa10.85□□□□□ -0.67
TPM4-209ENST00000588483 RAD54BQ9Y620 910 aa10.85□□□□□ -0.67
TPM4-209ENST00000588483 ITIH6Q6UXX5 1313 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 CEP192Q8TEP8 1941 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 CACNA1EQ15878 2313 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 IGLV3-10A0A075B6K4 115 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 IGHV1OR15-9A0A0B4J2B8 117 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 I6L893 689 aaPredicted RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 ZBTB24O43167 697 aaPredicted RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 PAGE1O75459 146 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 CCDC172P0C7W6 258 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 FERP16591 822 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 TFE3P19532 575 aaPredicted RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 PRKCHP24723 683 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 HOXD12P35452 270 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 MPLP40238 635 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 DPP6P42658 865 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 LIMK1P53667 647 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 OXCT1P55809 520 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 AUHQ13825 339 aaKnown RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 NR1I3Q14994 352 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 SKOR2Q2VWA4 1001 aaPredicted RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 PLEKHG6Q3KR16 790 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 FILIP1LQ4L180 1135 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 FSCBQ5H9T9 825 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 FIGNQ5HY92 759 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 RABGAP1LQ5R372 815 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 ARTNQ5T4W7 220 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 FBXL22Q6P050 247 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 SERPINA13PQ6UXR4 307 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 SLC36A4Q6YBV0 504 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 MMS22LQ6ZRQ5 1243 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 MON1BQ7L1V2 547 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 LPCAT2Q7L5N7 544 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 IRF2BP2Q7Z5L9 587 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 ZNF683Q8IZ20 524 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 RLN3Q8WXF3 142 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 SORCS1Q8WY21 1168 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 C1orf74Q96LT6 269 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 TBCBQ99426 244 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 ARRDC1-AS1Q9H2J1 176 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 ANLNQ9NQW6 1124 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 VPS45Q9NRW7 570 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 KIAA1522Q9P206 1035 aaPredicted RBP10.84□□□□□ -0.67
TPM4-209ENST00000588483 USP18Q9UMW8 372 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 PLA2G4CQ9UP65 541 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 HS3ST4Q9Y661 456 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 PI4KAP42356 2102 aa10.84□□□□□ -0.67
TPM4-209ENST00000588483 NYNRINQ9P2P1 1898 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 SYNJ2BP-COX16A0A087WUM0 186 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 TCRBV5S1A1TA0A578 114 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 C2CD4BA6NLJ0 364 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 H0Y626 953 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 AP5Z1O43299 807 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 SYNCRIPO60506 623 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 CLDN11O75508 207 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 ADCY5O95622 1261 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 CALB1P05937 261 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 EPHX1P07099 455 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 SRPRAP08240 638 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 POLR2EP19388 210 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 RDXP35241 583 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 PBX1P40424 430 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 CSKP41240 450 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 PRKCIP41743 596 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 PTPN9P43378 593 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 NSFP46459 744 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 ID4P47928 161 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 SULT1E1P49888 294 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 RNASE9P60153 205 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 ARID5AQ03989 594 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 DEUP1Q05D60 604 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 NME3Q13232 169 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 C2CD6Q53TS8 623 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 PITRM1Q5JRX3 1037 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 CXorf57Q6NSI4 855 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 PPP1R2P3Q6NXS1 205 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 SND1Q7KZF4 910 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM4-209ENST00000588483 TMPRSS6Q8IU80 811 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 CCDC117Q8IWD4 279 aaPredicted RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 CCAR2Q8N163 923 aaKnown RBP10.83□□□□□ -0.68
TPM4-209ENST00000588483 CFAP52Q8N1V2 620 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 PGBD3Q8N328 593 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 CARNMT1Q8N4J0 409 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 FRMD1Q8N878 549 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 C3orf20Q8ND61 904 aa10.83□□□□□ -0.68
TPM4-209ENST00000588483 OR2T3Q8NH03 318 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms