RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 SH3BP1Q9Y3L3 701 aa13.06□□□□□ -0.32
TMED1-204ENST00000588289 NUP205Q92621 2012 aa13.06□□□□□ -0.32
TMED1-204ENST00000588289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 ESYT3A0FGR9 886 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 WASH4PA8MWX3 477 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 AP3B1O00203 1094 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 DNALI1O14645 258 aaPredicted RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 DCLK1O15075 740 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 COCHO43405 550 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 ACSL4O60488 711 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 OPHN1O60890 802 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 SEC31AO94979 1220 aaKnown RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 OAS1P00973 400 aaKnown RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 CKMP06732 381 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 PECAM1P16284 738 aaPredicted RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 HDCP19113 662 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 FDFT1P37268 417 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 AVPR1AP37288 418 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 LMAN1P49257 510 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 NDST2P52849 883 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 PLTPP55058 493 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 C9orf50Q5SZB4 431 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 BEND6Q5SZJ8 279 aaPredicted RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 CNPY4Q8N129 248 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 ZNF557Q8N988 423 aaPredicted RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 AENQ8WTP8 325 aaKnown RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 HTR3CQ8WXA8 447 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 ART4Q93070 314 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 HDAC11Q96DB2 347 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 RTP4Q96DX8 246 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 RPRD1AQ96P16 312 aaPredicted RBP13.05□□□□□ -0.32
TMED1-204ENST00000588289 HERPUD2Q9BSE4 406 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 PHACTR1Q9C0D0 580 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 TLE6Q9H808 572 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 PIDD1Q9HB75 910 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 DTLQ9NZJ0 730 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 NUDT5Q9UKK9 219 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 HS3ST4Q9Y661 456 aa13.05□□□□□ -0.32
TMED1-204ENST00000588289 MYO18AQ92614 2054 aaKnown RBP13.04□□□□□ -0.32
TMED1-204ENST00000588289 LAMA2P24043 3122 aaKnown RBP13.04□□□□□ -0.32
TMED1-204ENST00000588289 GRM6O15303 877 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 PSMD3O43242 534 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 MFSD11O43934 449 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 HMBSP08397 361 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 MYL4P12829 197 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 BMP8BP34820 402 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 CHKAP35790 457 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 RPL21P46778 160 aaKnown RBP13.04□□□□□ -0.32
TMED1-204ENST00000588289 VPS41P49754 854 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 OXCT1P55809 520 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 YBEYP58557 167 aaPredicted RBP13.04□□□□□ -0.32
TMED1-204ENST00000588289 BASP1P80723 227 aaKnown RBP13.04□□□□□ -0.32
TMED1-204ENST00000588289 CDK16Q00536 496 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 ADCY2Q08462 1091 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 GALNT2Q10471 571 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 AUHQ13825 339 aaKnown RBP13.04□□□□□ -0.32
TMED1-204ENST00000588289 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 PARP15Q460N3 678 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 MS4A13Q5J8X5 152 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 C6orf118Q5T5N4 469 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 ADGRF1Q5T601 910 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 TMCO4Q5TGY1 634 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 ALS2CLQ60I27 953 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 CENPUQ71F23 418 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 ANKS1BQ7Z6G8 1248 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 ZDHHC14Q8IZN3 488 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 MREGQ8N565 214 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 RTL3Q8N8U3 475 aaKnown RBP13.04□□□□□ -0.32
TMED1-204ENST00000588289 FAM71DQ8N9W8 422 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 TTC25Q96NG3 672 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 OLFM3Q96PB7 478 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 FAM118BQ9BPY3 351 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 CORO1BQ9BR76 489 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 SFXN1Q9H9B4 322 aa13.04□□□□□ -0.32
TMED1-204ENST00000588289 C5orf60A6NFR6 353 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 CHADO15335 359 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 EIF3HO15372 352 aaKnown RBP eCLIP13.03□□□□□ -0.32
TMED1-204ENST00000588289 OPA1O60313 960 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 CLDN11O75508 207 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 GCATO75600 419 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 F11P03951 625 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 CYBBP04839 570 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 SPATA31D3P0C874 917 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 TACR2P21452 398 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 CCNCP24863 283 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 CORO1AP31146 461 aaKnown RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 GARSP41250 739 aaKnown RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 ITGA8P53708 1063 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 ARL4CP56559 192 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 MRPS25P82663 173 aaKnown RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 GBE1Q04446 702 aa13.03□□□□□ -0.32
TMED1-204ENST00000588289 PPIDQ08752 370 aaKnown RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 TRIP13Q15645 432 aaPredicted RBP13.03□□□□□ -0.32
TMED1-204ENST00000588289 MANEALQ5VSG8 457 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms