RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 WDR6Q9NNW5 1121 aaKnown RBP6.38□□□□□ -1.39
LIG3-206ENST00000586058 MAN1C1Q9NR34 630 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 ARHGEF4Q9NR80 690 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 CWC15Q9P013 229 aaKnown RBP6.38□□□□□ -1.39
LIG3-206ENST00000586058 SEPT10Q9P0V9 454 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 ANAPC5Q9UJX4 755 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 NUDT5Q9UKK9 219 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 SHOC2Q9UQ13 582 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 ZNF510Q9Y2H8 683 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 SNX24Q9Y343 169 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 SH3BP1Q9Y3L3 701 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 KIAA1549LQ6ZVL6 1849 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 DENND4AQ7Z401 1863 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 KIF26AQ9ULI4 1882 aaPredicted RBP6.38□□□□□ -1.39
LIG3-206ENST00000586058 PCNTO95613 3336 aa6.38□□□□□ -1.39
LIG3-206ENST00000586058 BCLAF3A2AJT9 711 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 LCHNA4D1U4 455 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZSCAN5CA6NGD5 496 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 C2orf71A6NGG8 1288 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ARHGAP42A6NI28 874 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 DFFAO00273 331 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 DNALI1O14645 258 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZNF197O14709 1029 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ADAM12O43184 909 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 OPA1O60313 960 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 LRIG2O94898 1065 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 SEC31AO94979 1220 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 SEC24AO95486 1093 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 LATS1O95835 1130 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 CYBBP04839 570 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 IVLP07476 585 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZDHHC11BP0C7U3 371 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 IRF1P10914 325 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 MYL4P12829 197 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PECAM1P16284 738 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 PTPN2P17706 415 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ERCC2P18074 760 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 AMPD1P23109 780 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PHBP35232 272 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 FDFT1P37268 417 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ETFBP38117 255 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PTGIRP43119 386 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PITX1P78337 314 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 MRPS25P82663 173 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 RBM10P98175 930 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 NRG1Q02297 640 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZNF33AQ06730 810 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PRPSAP1Q14558 356 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 MORF4L2Q15014 288 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PAFAH1B3Q15102 231 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 TRIP13Q15645 432 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 OASLQ15646 514 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 CA9Q16790 459 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 RAB6CQ53S08 254 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 SPDYCQ5MJ68 293 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 RASIP1Q5U651 963 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 SNX30Q5VWJ9 437 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 DENND2CQ68D51 928 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 DUPD1Q68J44 220 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 TTC27Q6P3X3 843 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 CENPUQ71F23 418 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 DNAJB7Q7Z6W7 309 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 SCD5Q86SK9 330 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 LRRC49Q8IUZ0 686 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PPIL6Q8IXY8 311 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 GSPT2Q8IYD1 628 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 TNS4Q8IZW8 715 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PYROXD2Q8N2H3 581 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 PLD5Q8N7P1 536 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 MRPL43Q8N983 215 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZNF557Q8N988 423 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 PCDH19Q8TAB3 1148 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 HTR3CQ8WXA8 447 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 HDAC11Q96DB2 347 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZFRQ96KR1 1074 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 FCRL2Q96LA5 508 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 C1orf74Q96LT6 269 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 TTC25Q96NG3 672 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 CDCA3Q99618 268 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 CORO1BQ9BR76 489 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 C17orf80Q9BSJ5 609 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 RAB6CQ9H0N0 254 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ATXN3LQ9H3M9 355 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 CCSER2Q9H7U1 834 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 VIPAS39Q9H9C1 493 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 SP110Q9HB58 689 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 DZANK1Q9NVP4 752 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZDHHC7Q9NXF8 308 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 KLHL8Q9P2G9 620 aaPredicted RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 PPARGC1AQ9UBK2 798 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 VANGL2Q9ULK5 521 aa6.37□□□□□ -1.39
LIG3-206ENST00000586058 TPX2Q9ULW0 747 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 R3HDM2Q9Y2K5 976 aaKnown RBP6.37□□□□□ -1.39
LIG3-206ENST00000586058 ZNF840PA6NDX5 716 aa6.36□□□□□ -1.39
LIG3-206ENST00000586058 SOBPA7XYQ1 873 aa6.36□□□□□ -1.39
LIG3-206ENST00000586058 H3BNC9 293 aa6.36□□□□□ -1.39
LIG3-206ENST00000586058 AP3B1O00203 1094 aa6.36□□□□□ -1.39
LIG3-206ENST00000586058 DCLK1O15075 740 aa6.36□□□□□ -1.39
LIG3-206ENST00000586058 CHADO15335 359 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms