RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CNTFP26441 200 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 CCR1P32246 355 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 IFNAR2P48551 515 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 EIF4EBP2Q13542 120 aaPredicted RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 MRPL58Q14197 206 aaKnown RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 SEPT7Q16181 437 aaKnown RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 VARS2Q5ST30 1063 aaKnown RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 TTC39BQ5VTQ0 682 aaPredicted RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 NUGGCQ68CJ6 796 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 MSANTD2Q6P1R3 559 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 ZNF449Q6P9G9 518 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 C6orf89Q6UWU4 347 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 DENND5BQ6ZUT9 1274 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 Q7L0L9 218 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 PIGWQ7Z7B1 504 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 MON1AQ86VX9 555 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 SCN4BQ8IWT1 228 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 C2orf15Q8WU43 125 aaKnown RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 MTBPQ96DY7 904 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 SIGLEC10Q96LC7 697 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 SERPINB11Q96P15 392 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 PPP1R2P1Q96PQ5 205 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 LGMNQ99538 433 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 DONSONQ9NYP3 566 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 FNIP2Q9P278 1114 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 KLHL8Q9P2G9 620 aaPredicted RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 PRG3Q9Y2Y8 225 aaPredicted RBP11.58□□□□□ -0.56
LIG3-204ENST00000585740 MFHAS1Q9Y4C4 1052 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 UNC80Q8N2C7 3258 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 SHROOM3Q8TF72 1996 aa11.58□□□□□ -0.56
LIG3-204ENST00000585740 TCP11X1B4DZS4 312 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 FAM72CH0Y354 149 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 NBNO60934 754 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 KRT37O76014 449 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 LRIG2O94898 1065 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 RTN3O95197 1032 aaPredicted RBP11.57□□□□□ -0.56
LIG3-204ENST00000585740 ASMTLO95671 621 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 ALDH2P05091 517 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 CA4P22748 312 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 DNAJB2P25686 324 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 EPHB2P29323 1055 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 HOXC13P31276 330 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 GARSP41250 739 aaKnown RBP11.57□□□□□ -0.56
LIG3-204ENST00000585740 PSEN1P49768 467 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 WASHC5Q12768 1159 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 MTA1Q13330 715 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 PRPSAP1Q14558 356 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 LRRC14Q15048 493 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 QPCTQ16769 361 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 KBTBD12Q3ZCT8 623 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 CTXN3Q4LDR2 81 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 ACBD5Q5T8D3 534 aaPredicted RBP11.57□□□□□ -0.56
LIG3-204ENST00000585740 FAM72AQ5TYM5 149 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 HHATQ5VTY9 493 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 STEAP4Q687X5 459 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 FAM72DQ6L9T8 149 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 RGS9BPQ6ZS82 235 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 CCDC121Q6ZUS5 278 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 ZNF534Q76KX8 674 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 PID1Q7Z2X4 250 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 LRRC6Q86X45 466 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 FAM72BQ86X60 149 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 NPAS4Q8IUM7 802 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 LRRC49Q8IUZ0 686 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 IGDCC3Q8IVU1 814 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 ZNF567Q8N184 647 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 OTUD6BQ8N6M0 293 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 SPPL2BQ8TCT7 592 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 DENND1AQ8TEH3 1009 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 TBC1D31Q96DN5 1066 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 STAMBPL1Q96FJ0 436 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 CASD1Q96PB1 797 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 TSGA13Q96PP4 275 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 TGS1Q96RS0 853 aaKnown RBP11.57□□□□□ -0.56
LIG3-204ENST00000585740 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 OLA1Q9NTK5 396 aaKnown RBP11.57□□□□□ -0.56
LIG3-204ENST00000585740 ABI2Q9NYB9 513 aaPredicted RBP11.57□□□□□ -0.56
LIG3-204ENST00000585740 SEPT10Q9P0V9 454 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 FNDC1Q4ZHG4 1894 aaPredicted RBP11.57□□□□□ -0.56
LIG3-204ENST00000585740 NUP205Q92621 2012 aa11.57□□□□□ -0.56
LIG3-204ENST00000585740 TYROBPO43914 113 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 B4GALT3O60512 393 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 AVILO75366 819 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 SPAG7O75391 227 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 KRT38O76015 456 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 SUN1O94901 812 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 SNRPAP09012 282 aaKnown RBP11.56□□□□□ -0.56
LIG3-204ENST00000585740 ALADP13716 330 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 FGFR3P22607 806 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 PTPN3P26045 913 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 PSMB4P28070 264 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 PPARDQ03181 441 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 SLC18A2Q05940 514 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 MPP2Q14168 576 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 EFTUD2Q15029 972 aaKnown RBP eCLIP11.56□□□□□ -0.563e-7■■■■■ 31.4
LIG3-204ENST00000585740 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 UNC5AQ6ZN44 842 aa11.56□□□□□ -0.56
LIG3-204ENST00000585740 SCD5Q86SK9 330 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms