RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 BATF3Q9NR55 127 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PCSK1NQ9UHG2 260 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 IQANK1A0A1B0GTG1 560 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FOXO6A8MYZ6 492 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SPAG7O75391 227 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DAB1O75553 588 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SOAT2O75908 522 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FGF18O76093 207 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 KRT16P08779 473 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TFE3P19532 575 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 IL1R2P27930 398 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ELF1P32519 619 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 RPL22P35268 128 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MATKP42679 507 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PTPN9P43378 593 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DNAJC3Q13217 504 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SEPT7Q16181 437 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PM20D1Q6GTS8 502 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TLDC1Q6P9B6 456 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 KCTD6Q8NC69 237 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 STKLD1Q8NE28 680 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FAM172AQ8WUF8 416 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 AUTS2Q8WXX7 1259 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ZNF75CPQ92670 426 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CLP1Q92989 425 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 C8orf48Q96LL4 319 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CLSTN3Q9BQT9 956 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ZWILCHQ9H900 591 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ETNK1Q9HBU6 452 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 NGRNQ9NPE2 291 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 USP3Q9Y6I4 520 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CLUHO75153 1309 aa15.44■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MYO16Q9Y6X6 1858 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PLXNA4Q9HCM2 1894 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CFAP69A5D8W1 941 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TGDSO95455 350 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TRUB2O95900 331 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 URODP06132 367 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TROVE2P10155 538 aaKnown RBP eCLIP15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DESP17661 470 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 KRT4P19013 534 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DNAJB2P25686 324 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DUSP4Q13115 394 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SMTNL2Q2TAL5 461 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DCAF6Q58WW2 860 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 KCNT1Q5JUK3 1230 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 LVRNQ6Q4G3 990 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 BHLHA9Q7RTU4 235 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MZB1Q8WU39 189 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 C2orf15Q8WU43 125 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 C10orf82Q8WW14 230 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ACSF2Q96CM8 615 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SEPT5Q99719 369 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ADAM33Q9BZ11 813 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CXorf56Q9H5V9 222 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 POPDC2Q9HBU9 364 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 LNPEPQ9UIQ6 1025 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 USP18Q9UMW8 372 aa15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ZNF487B1APH4 448 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CHADO15335 359 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 LTFP02788 710 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FYNP06241 537 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 GSTA2P09210 222 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 HAPLN1P10915 354 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 NOS2P35228 1153 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 EIF3EP60228 445 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 DPYSL3Q14195 570 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PDK2Q15119 407 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SLC1A5Q15758 541 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SYPL2Q5VXT5 272 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SCYL2Q6P3W7 929 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 FAM47EQ6ZV65 393 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CHSY1Q86X52 802 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MAP7D3Q8IWC1 876 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 NUP93Q8N1F7 819 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SCML4Q8N228 414 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MAB21L3Q8N8X9 362 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 BANPQ8N9N5 519 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 KLHL23Q8NBE8 558 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 GPR152Q8TDT2 470 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 AGAP11Q8TF27 550 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 IRGQQ8WZA9 623 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SLC2A13Q96QE2 648 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 TBCBQ99426 244 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 PAFAH2Q99487 392 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 C11orf84Q9BUA3 381 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MAK16Q9BXY0 300 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 MYLK2Q9H1R3 596 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CHKBQ9Y259 395 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 C15orf41Q9Y2V0 281 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ZNF638Q14966 1978 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 CAPN9O14815 690 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 ANP32DO95626 131 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 SULT1E1P49888 294 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 HDAC4P56524 1084 aa15.42■□□□□ 0.06
CDK5RAP3-236ENST00000584991 E2F5Q15329 346 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms