RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CHADO15335 359 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TP73O15350 636 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ABHD2P08910 425 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 MX2P20592 715 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 PMLP29590 882 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 GRK4P32298 578 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CUL3Q13618 768 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 VWA5B1Q5TIE3 1220 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 GDF6Q6KF10 455 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CLEC20AQ6ZU45 233 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 PTAR1Q7Z6K3 402 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ANKRD23Q86SG2 305 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TRIM42Q8IWZ5 723 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ELMO2Q96JJ3 720 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ZNF512Q96ME7 567 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 AGAP2Q99490 1192 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TBC1D10AQ9BXI6 508 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 AGO3Q9H9G7 860 aaKnown RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 MIOSQ9NXC5 875 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TRPV2Q9Y5S1 764 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 GPC4O75487 556 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 PFKMP08237 780 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 TSPAN8P19075 237 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 CASP2P42575 452 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 LHX1P48742 406 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 PEX6Q13608 980 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 GRB14Q14449 540 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 GPRIN1Q7Z2K8 1008 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 TMEM110Q86TL2 294 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 NT5DC4Q86YG4 428 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 ZNF567Q8N184 647 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 ARHGAP24Q8N264 748 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 SLC26A7Q8TE54 656 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 SMPD4Q9NXE4 827 aa11.58□□□□□ -0.55
TOP3A-217ENST00000584582 KIAA1217Q5T5P2 1943 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 CCDC160A6NGH7 325 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 TBX18O95935 607 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 USP4Q13107 963 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 KCNA10Q16322 511 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 FAM171A1Q5VUB5 890 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 C6orf89Q6UWU4 347 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 YTHDF3Q7Z739 585 aaKnown RBP11.58□□□□□ -0.56
TOP3A-217ENST00000584582 EFHBQ8N7U6 833 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 TTC8Q8TAM2 541 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 BLOC1S5Q8TDH9 187 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 SLC44A1Q8WWI5 657 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 RMDN1Q96DB5 314 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 SLC4A5Q9BY07 1137 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 FAM8A1Q9UBU6 413 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 XPO1O14980 1071 aaKnown RBP11.58□□□□□ -0.56
TOP3A-217ENST00000584582 SPAG6O75602 509 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 F2P00734 622 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 DNAJB2P25686 324 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 MPP3Q13368 585 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 UBAP2LQ14157 1087 aaKnown RBP11.58□□□□□ -0.56
TOP3A-217ENST00000584582 TSNAXIP1Q2TAA8 658 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 CHSY1Q86X52 802 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 HDAC11Q96DB2 347 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 SMARCD1Q96GM5 515 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 EXOC2Q96KP1 924 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 MARK4Q96L34 752 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 COLEC11Q9BWP8 271 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 WWP1Q9H0M0 922 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 ADAMTS10Q9H324 1103 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 GABRQQ9UN88 632 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 PSAT1Q9Y617 370 aa11.58□□□□□ -0.56
TOP3A-217ENST00000584582 GPR32O75388 356 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 LRIG2O94898 1065 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 CDH5P33151 784 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 MSX2P35548 267 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 SERPINB5P36952 375 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 FCGRTP55899 365 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 LAYNQ6UX15 382 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 LDB1Q86U70 411 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 CIR1Q86X95 450 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 CLPTM1LQ96KA5 538 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 NMUR2Q9GZQ4 415 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 USP29Q9HBJ7 922 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 ARL8BQ9NVJ2 186 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 A0A096LPK6 155 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 SPRP35270 261 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 PRKCZQ05513 592 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 NSUN2Q08J23 767 aaKnown RBP eCLIP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 INCA1Q0VD86 236 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 MMEL1Q495T6 779 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 CTXN3Q4LDR2 81 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 NOMO2Q5JPE7 1267 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 DRICH1Q6PGQ1 229 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 NSL1Q96IY1 281 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 ZIC5Q96T25 663 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 NDNQ99608 321 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 FRMD8P1Q9BZ68 369 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-217ENST00000584582 LGALS13Q9UHV8 139 aa11.57□□□□□ -0.56
TOP3A-217ENST00000584582 CCDC22O60826 627 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms