RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 DEFB119Q8N690 84 aa21.12■□□□□ 0.97
SS18-224ENST00000584083 PIGKQ92643 395 aa21.12■□□□□ 0.97
SS18-224ENST00000584083 DLL3Q9NYJ7 618 aa21.12■□□□□ 0.97
SS18-224ENST00000584083 KIAA1522Q9P206 1035 aaPredicted RBP21.12■□□□□ 0.97
SS18-224ENST00000584083 IGHV1OR15-9A0A0B4J2B8 117 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 AP5Z1O43299 807 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 GDF9O60383 454 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 KLHL40Q2TBA0 621 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 FILIP1LQ4L180 1135 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 FSCBQ5H9T9 825 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 MMS22LQ6ZRQ5 1243 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 TMPRSS6Q8IU80 811 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 ZNF366Q8N895 744 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 NETO1Q8TDF5 533 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 LMLNQ96KR4 655 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 PRMT1Q99873 361 aaKnown RBP21.11■□□□□ 0.97
SS18-224ENST00000584083 MKRN2Q9H000 416 aaKnown RBP21.11■□□□□ 0.97
SS18-224ENST00000584083 PIGVQ9NUD9 493 aa21.11■□□□□ 0.97
SS18-224ENST00000584083 TNRC6BQ9UPQ9 1833 aaKnown RBP21.11■□□□□ 0.97
SS18-224ENST00000584083 SYCE3A1L190 88 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 TEX33O43247 280 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 NDUFS2O75306 463 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 PAGE1O75459 146 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 MOCS3O95396 460 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 F9P00740 461 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 CYP1A1P04798 512 aaPredicted RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 TFE3P19532 575 aaPredicted RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 CSKP41240 450 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 PTGER3P43115 390 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 DEUP1Q05D60 604 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 PTPRNQ16849 979 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 SPDYCQ5MJ68 293 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 TTC39BQ5VTQ0 682 aaPredicted RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 TCEAL6Q6IPX3 200 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 DGLUCYQ7Z3D6 616 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 CIR1Q86X95 450 aaPredicted RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 SLC30A5Q8TAD4 765 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 PRCCQ92733 491 aaPredicted RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 TCEAL3Q969E4 200 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 TTC17Q96AE7 1141 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 SIPA1Q96FS4 1042 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 RPRD1AQ96P16 312 aaPredicted RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 TBCBQ99426 244 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 SIK2Q9H0K1 926 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 TMEM245Q9H330 911 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 WDCPQ9H6R7 721 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 CD93Q9NPY3 652 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 SEPT11Q9NVA2 429 aaKnown RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 VANGL2Q9ULK5 521 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 PAXBP1Q9Y5B6 917 aa21.1■□□□□ 0.97
SS18-224ENST00000584083 MUC22E2RYF6 1773 aaPredicted RBP21.1■□□□□ 0.97
SS18-224ENST00000584083 ASLP04424 464 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 MMP8P22894 467 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 PI4KAP42356 2102 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 CXCR3P49682 368 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 ST8SIA6P61647 398 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 CAMK2GQ13555 558 aaPredicted RBP21.09■□□□□ 0.97
SS18-224ENST00000584083 AUHQ13825 339 aaKnown RBP21.09■□□□□ 0.97
SS18-224ENST00000584083 SLC25A52Q3SY17 297 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 PITRM1Q5JRX3 1037 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 BRMS1LQ5PSV4 323 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 OTUD1Q5VV17 481 aaPredicted RBP21.09■□□□□ 0.97
SS18-224ENST00000584083 LYSMD4Q5XG99 296 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 FBXL22Q6P050 247 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 PHLDB2Q86SQ0 1253 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 CACUL1Q86Y37 369 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 CCAR2Q8N163 923 aaKnown RBP21.09■□□□□ 0.97
SS18-224ENST00000584083 OR2T3Q8NH03 318 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 ADAM33Q9BZ11 813 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 TKTL2Q9H0I9 626 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 RTN4Q9NQC3 1192 aaKnown RBP21.09■□□□□ 0.97
SS18-224ENST00000584083 INTS6Q9UL03 887 aaKnown RBP21.09■□□□□ 0.97
SS18-224ENST00000584083 HS3ST4Q9Y661 456 aa21.09■□□□□ 0.97
SS18-224ENST00000584083 A0A1B0GVM2 712 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 TCAF2A6NFQ2 919 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 KHNYNO15037 678 aaKnown RBP21.08■□□□□ 0.97
SS18-224ENST00000584083 ADCY5O95622 1261 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 ACADMP11310 421 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 FLT3P36888 993 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 GGCXP38435 758 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 COPAP53621 1224 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 ATXN1P54253 815 aaKnown RBP21.08■□□□□ 0.97
SS18-224ENST00000584083 CENPCQ03188 943 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 METTL3Q86U44 580 aaKnown RBP21.08■□□□□ 0.97
SS18-224ENST00000584083 NT5C3BQ969T7 300 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 PGAP3Q96FM1 320 aaPredicted RBP21.08■□□□□ 0.97
SS18-224ENST00000584083 PCDHB18PQ96TA0 734 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 C11orf70Q9BRQ4 267 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 RTKNQ9BST9 563 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 FUCA2Q9BTY2 467 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 ITM2CQ9NQX7 267 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 METTL5Q9NRN9 209 aaKnown RBP21.08■□□□□ 0.97
SS18-224ENST00000584083 RXFP3Q9NSD7 469 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 SUN2Q9UH99 717 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 TMEM59LQ9UK28 342 aa21.08■□□□□ 0.97
SS18-224ENST00000584083 CCDC172P0C7W6 258 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 PTMSP20962 102 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 CD6P30203 668 aa21.07■□□□□ 0.96
SS18-224ENST00000584083 NSFP46459 744 aaKnown RBP21.07■□□□□ 0.96
SS18-224ENST00000584083 RNF219Q5W0B1 726 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms