RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 KIAA1522Q9P206 1035 aaPredicted RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 USP36Q9P275 1121 aaKnown RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 EVLQ9UI08 416 aaPredicted RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 TMEM59LQ9UK28 342 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.24□□□□□ -0.77
SKA2-208ENST00000583927 DOCK9Q9BZ29 2069 aa10.24□□□□□ -0.77
SKA2-208ENST00000583927 A0A1B0GVM2 712 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 TCAF2A6NFQ2 919 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 F5H5T6 163 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 M0QYT0 321 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 SLC30A4O14863 429 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 SYNCRIPO60506 623 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 GRAP2O75791 330 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 GFPT2O94808 682 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 ENDOD1O94919 500 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 CAVIN2O95810 425 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 SRPRAP08240 638 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 UNGP13051 313 aaPredicted RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 ATP1A3P13637 1013 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 CHRNB2P17787 502 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 POLR2EP19388 210 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 CD70P32970 193 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 WASP42768 502 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 PLK1P53350 603 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 COPAP53621 1224 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 CENPCQ03188 943 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 ARID5AQ03989 594 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 ZBTB16Q05516 673 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 LMAN2Q12907 356 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 CDH18Q13634 790 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 RABGAP1LQ5R372 815 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 OTUD1Q5VV17 481 aaPredicted RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 TAF3Q5VWG9 929 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 CAVIN1Q6NZI2 390 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 SERPINA13PQ6UXR4 307 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 RABEPKQ7Z6M1 372 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 CHSY1Q86X52 802 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 TMPRSS6Q8IU80 811 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 SYT12Q8IV01 421 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 LGI2Q8N0V4 545 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 RLN3Q8WXF3 142 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 MYEOVQ96EZ4 313 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 MYO19Q96H55 970 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 ZNF419Q96HQ0 510 aaPredicted RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 C1orf74Q96LT6 269 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 PPP1R9BQ96SB3 815 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 MKRN2Q9H000 416 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 PCED1AQ9H1Q7 454 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 NLRC4Q9NPP4 1024 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 RTN4Q9NQC3 1192 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 ITM2CQ9NQX7 267 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 SUN2Q9UH99 717 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 XPO7Q9UIA9 1087 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 CDV3Q9UKY7 258 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 INTS6Q9UL03 887 aaKnown RBP10.23□□□□□ -0.77
SKA2-208ENST00000583927 RAD54BQ9Y620 910 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 ITIH6Q6UXX5 1313 aa10.23□□□□□ -0.77
SKA2-208ENST00000583927 A0A1W2PQC6 194 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 MAP3K13O43283 966 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 MOCS3O95396 460 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 MOCS2O96007 188 aaPredicted RBP10.22□□□□□ -0.77
SKA2-208ENST00000583927 EPHX1P07099 455 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 CCDC172P0C7W6 258 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 PRKCHP24723 683 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 OXTRP30559 389 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 ZNF165P49910 485 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 ATXN1P54253 815 aaKnown RBP10.22□□□□□ -0.77
SKA2-208ENST00000583927 CREB5Q02930 508 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 SULT2A1Q06520 285 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 AUHQ13825 339 aaKnown RBP10.22□□□□□ -0.77
SKA2-208ENST00000583927 IQCB1Q15051 598 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 FSCBQ5H9T9 825 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 FAM102AQ5T9C2 384 aaPredicted RBP10.22□□□□□ -0.77
SKA2-208ENST00000583927 NAA35Q5VZE5 725 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 RAP1GAP2Q684P5 730 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 PPP1R2P3Q6NXS1 205 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 SLC23A3Q6PIS1 610 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 SND1Q7KZF4 910 aaKnown RBP eCLIP10.22□□□□□ -0.77
SKA2-208ENST00000583927 CYP2U1Q7Z449 544 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 C12orf50Q8NA57 414 aaPredicted RBP10.22□□□□□ -0.77
SKA2-208ENST00000583927 CADM4Q8NFZ8 388 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 OR2T3Q8NH03 318 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 CEP76Q8TAP6 659 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 SLC20A1Q8WUM9 679 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 SORCS1Q8WY21 1168 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 FOXJ1Q92949 421 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 SIPA1Q96FS4 1042 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 ANP32EQ9BTT0 268 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 RETREG1Q9H6L5 497 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 WDCPQ9H6R7 721 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 PIGVQ9NUD9 493 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 WSB2Q9NYS7 404 aaPredicted RBP10.22□□□□□ -0.77
SKA2-208ENST00000583927 STIM2Q9P246 746 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 PILRBQ9UKJ0 227 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 SCML1Q9UN30 329 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 INVSQ9Y283 1065 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 HS3ST4Q9Y661 456 aa10.22□□□□□ -0.77
SKA2-208ENST00000583927 TMEM131Q92545 1883 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms