RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 CRYMQ14894 314 aa10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 RWDD4Q6NW29 188 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TRIB2Q92519 343 aa10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 BRD8Q9H0E9 1235 aa10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TKTL2Q9H0I9 626 aa10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 SENP1Q9P0U3 644 aa10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 MTF2Q9Y483 593 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PCDHA11Q9Y5I1 949 aa10.99□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DAB1O75553 588 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 MT-CYBP00156 380 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PRKCGP05129 697 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ENO1P06733 434 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ALADP13716 330 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ARSAP15289 507 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PTPN3P26045 913 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 AVPR1AP37288 418 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DAOAP59103 153 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 SEMA5AQ13591 1074 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DPYSQ14117 519 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 N4BP2L1Q5TBK1 243 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ZNF280DQ6N043 979 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TAC4Q86UU9 113 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 RASSF3Q86WH2 238 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 RASAL3Q86YV0 1011 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ZNF669Q96BR6 464 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 MLPHQ9BV36 600 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CADM1Q9BY67 442 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 VPS11Q9H270 941 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DENND2DQ9H6A0 471 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CHRAC1Q9NRG0 131 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TSC2P49815 1807 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 C9IYK1 514 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 HHLA1C9JL84 531 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DFFAO00273 331 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 FCHO1O14526 889 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DCLK1O15075 740 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TM9SF1O15321 606 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 GJB3O75712 270 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ZMPSTE24O75844 475 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 NFKB1P19838 968 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 WARSP23381 471 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ADRA1BP35368 520 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CXCR3P49682 368 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 AQP5P55064 265 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 GJA9P57773 515 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 MRPS6P82932 125 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 KDSRQ06136 332 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 XKR4Q5GH76 650 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 FYB2Q5VWT5 728 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PACS1Q6VY07 963 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 RGS9BPQ6ZS82 235 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 NUDCD3Q8IVD9 361 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TTC9BQ8N6N2 239 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 POU5F2Q8N7G0 328 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 STK32AQ8WU08 396 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 NSMCE1Q8WV22 266 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 RNF34Q969K3 372 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TNIP3Q96KP6 325 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 RPS6KL1Q9Y6S9 549 aa10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-225ENST00000582482 GABRDO14764 452 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 KRT37O76014 449 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 LRIG2O94898 1065 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 MYCP01106 439 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 JCHAINP01591 159 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CCND3P30281 292 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 NOS2P35228 1153 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CPT1AP50416 773 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TPI1P60174 286 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PREPLQ4J6C6 727 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TEX44Q53QW1 395 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 HSP90AA5PQ58FG0 334 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 EFHC1Q5JVL4 640 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 IL31Q6EBC2 164 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 LIMS2Q7Z4I7 341 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 SLC25A41Q8N5S1 370 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DTX3LQ8TDB6 740 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 WDR60Q8WVS4 1066 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 FAXDC2Q96IV6 333 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ZNF570Q96NI8 536 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TRIM55Q9BYV6 548 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PNPOQ9NVS9 261 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TMEM216Q9P0N5 145 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CPSF2Q9P2I0 782 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PPARGC1AQ9UBK2 798 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PACSIN3Q9UKS6 424 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 LOC102724159A0A0B4J2E5 919 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CCL22O00626 93 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 C2CD2LO14523 706 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 THP07101 528 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 TROVE2P10155 538 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 RPL34P49207 117 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 ITGA7Q13683 1181 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 PWP2Q15269 919 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 FASTKD1Q53R41 847 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 CD300LGQ6UXG3 332 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 STRADAQ7RTN6 431 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 C10orf107Q8IVU9 208 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 DNAAF3Q8N9W5 541 aa10.97□□□□□ -0.65
CDK5RAP3-225ENST00000582482 GTF3C2Q8WUA4 911 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms