RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 DDX21Q9NR30 783 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 CHPF2Q9P2E5 772 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 IPO11Q9UI26 975 aaKnown RBP3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 DTX4Q9Y2E6 619 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 PCDHGB1Q9Y5G3 927 aa3.9□□□□□ -1.79
SMCHD1-206ENST00000581631 SRRM3A6NNA2 597 aaPredicted RBP3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 SMTNL1A8MU46 457 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 BECN2A8MW95 431 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 M0QZQ0 153 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 KPNA5O15131 536 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 LDB3O75112 727 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 KLKB1P03952 638 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 SLC3A2P08195 630 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 RPL17P18621 184 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 TCEA1P23193 301 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 PIK3CBP42338 1070 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 ABATP80404 500 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 TRAF1Q13077 416 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 GPS2Q13227 327 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 DAG1Q14118 895 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 ELF2Q15723 593 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 TMEM196Q5HYL7 178 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 HIST2H2BCQ6DN03 193 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 RNF44Q7L0R7 432 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 C16orf82Q7Z2V1 217 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 ARMC9Q7Z3E5 817 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 KRT28Q7Z3Y7 464 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 FAM47BQ8NA70 645 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 STRBPQ96SI9 672 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 TM6SF1Q9BZW5 370 aa3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 UNKQ9C0B0 810 aaKnown RBP3.89□□□□□ -1.79
SMCHD1-206ENST00000581631 FOXO6A8MYZ6 492 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 BTBD18B2RXH4 712 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 RHODO00212 210 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 SPRY3O43610 288 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 ANXA2P07355 339 aaKnown RBP3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 DRD1P21728 446 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 PCYT1AP49585 367 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 IZUMO4Q1ZYL8 232 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 COBLL1Q53SF7 1204 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 PRAMEF19Q5SWL8 479 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 KLHDC7AQ5VTJ3 777 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 LRIG3Q6UXM1 1119 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 PAQR4Q8N4S7 273 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 OVCA2Q8WZ82 227 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 KAT2AQ92830 837 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 IQCDQ96DY2 449 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 GPR78Q96P69 363 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 ZNF347Q96SE7 839 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 KRCC1Q9NPI7 259 aaPredicted RBP3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 PTGDR2Q9Y5Y4 395 aa3.88□□□□□ -1.79
SMCHD1-206ENST00000581631 A0A1B0GVT2 93 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 POM121BA6NF01 834 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 OR6C75A6NL08 312 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 PPP6R2O75170 966 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 CPA1P15085 419 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 MMP8P22894 467 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 ATICP31939 592 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 SLC8A1P32418 973 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 ZNF543Q08ER8 600 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 TTC39AQ5SRH9 613 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 KDELC2Q7Z4H8 507 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 SDR16C5Q8N3Y7 309 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 CCDC33Q8N5R6 958 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 LRRC46Q96FV0 321 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 C8orf48Q96LL4 319 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 TRIM2Q9C040 744 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 HEYLQ9NQ87 328 aaPredicted RBP3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 B3GNT3Q9Y2A9 372 aa3.87□□□□□ -1.79
SMCHD1-206ENST00000581631 DPPA5A6NC42 116 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 OR2W5A6NFC9 320 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 THAP12O43422 761 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 CGAP01215 116 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 ALADP13716 330 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 SLC5A1P13866 664 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 SLC5A2P31639 672 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 CIITAP33076 1130 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 KCNJ4P48050 445 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 PRIM2P49643 509 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 COASYQ13057 564 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 GPS1Q13098 491 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 BFSP2Q13515 415 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 OTUD3Q5T2D3 398 aaPredicted RBP3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 TLDC1Q6P9B6 456 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 PIK3AP1Q6ZUJ8 805 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 CCAR1Q8IX12 1150 aaKnown RBP3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 ATP11CQ8NB49 1132 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 ABHD5Q8WTS1 349 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 ADAMTS14Q8WXS8 1223 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 SARGQ9BW04 601 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 MAGEH1Q9H213 219 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 ZBTB26Q9HCK0 441 aa3.86□□□□□ -1.79
SMCHD1-206ENST00000581631 APAF1O14727 1248 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 PMM2O15305 246 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 KCNQ3O43525 872 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 KAT7O95251 611 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 MYL3P08590 195 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 ARSBP15848 533 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 TSHRP16473 764 aa3.85□□□□□ -1.79
SMCHD1-206ENST00000581631 MST1P26927 711 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms