RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 RARGP13631 454 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 WT1P19544 449 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 TGM2P21980 687 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 DGKAP23743 735 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 ABCD1P33897 745 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 DDIT3P35638 169 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 DUSP3P51452 185 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 EHHADHQ08426 723 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 E2F5Q15329 346 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 TGIF1Q15583 401 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 USP53Q70EK8 1073 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 KIAA0907Q7Z7F0 614 aaPredicted RBP8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 SFR1Q86XK3 245 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 PTRH1Q86Y79 214 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM217AQ8IXS0 508 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 MFSD2AQ8NA29 543 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 FBXO18Q8NFZ0 1043 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 GOLGA1Q92805 767 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 HVCN1Q96D96 273 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 SMARCD1Q96GM5 515 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 ANKRD36BP1Q96IX9 119 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 C8orf76Q96K31 380 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 APOLD1Q96LR9 279 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 SLC2A11Q9BYW1 496 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 SLC25A18Q9H1K4 315 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 PCIF1Q9H4Z3 704 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 CSNK1G1Q9HCP0 422 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 KRT82Q9NSB4 513 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 ARHGAP20Q9P2F6 1191 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 AGO1Q9UL18 857 aaKnown RBP8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 NCKAP1Q9Y2A7 1128 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 CELSR2Q9HCU4 2923 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 VWA3AA6NCI4 1184 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 LRRC72A6NJI9 287 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 HHLA1C9JL84 531 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 MID1O15344 667 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 FFAR2O15552 330 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 LATO43561 262 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 TBCAO75347 108 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 AP1G2O75843 785 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 LDHAP00338 332 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CENPBP07199 599 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 HMBSP08397 361 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 SFTPCP11686 197 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 GARTP22102 1010 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 HOXD9P28356 352 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CORO1AP31146 461 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CHKAP35790 457 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 GMPRP36959 345 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CASP5P51878 434 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 PDX1P52945 283 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 ADPRHP54922 357 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 ARID5AQ03989 594 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 PDE4CQ08493 712 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 KRTAP21-3Q3LHN1 58 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 SLC45A4Q5BKX6 768 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 C10orf120Q5SQS8 335 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 NAPEPLDQ6IQ20 393 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CHST9Q7L1S5 443 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 TRAPPC11Q7Z392 1133 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 SCD5Q86SK9 330 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CCDC83Q8IWF9 413 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CPXM2Q8N436 756 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 AADATQ8N5Z0 425 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 ZNF564Q8TBZ8 553 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 GANCQ8TET4 914 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 DDI1Q8WTU0 396 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 HTR3CQ8WXA8 447 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CDK5RAP3Q96JB5 506 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 MED10Q9BTT4 135 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 FUCA2Q9BTY2 467 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 FGFBP2Q9BYJ0 223 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 FBXO44Q9H4M3 255 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 LRRC4CQ9HCJ2 640 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 GEMIN8Q9NWZ8 242 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 PLEKHB1Q9UF11 243 aaPredicted RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 SCML1Q9UN30 329 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 SCML2Q9UQR0 700 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 CA5BQ9Y2D0 317 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 ZNF510Q9Y2H8 683 aa8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 FCF1Q9Y324 198 aaKnown RBP8.02□□□□□ -1.13
SMARCE1-217ENST00000580654 OTOGQ6ZRI0 2925 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 NF1P21359 2839 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 SIN3BO75182 1162 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 RNASEH2AO75792 299 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 TNFSF15O95150 251 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 GJB6O95452 261 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 TNNC2P02585 160 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 KRT18P05783 430 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 THEGLP0DJG4 465 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 CCDC130P13994 396 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 AFMP43652 599 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 INHBCP55103 352 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 MAP3K7CLP57077 242 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 CYP4F2P78329 520 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 ANKRD1Q15327 319 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 CST6Q15828 149 aa8.01□□□□□ -1.13
SMARCE1-217ENST00000580654 DUOXA2Q1HG44 320 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms