RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 DNTTP04053 509 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CSKP41240 450 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 PDCLQ13371 301 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CDH18Q13634 790 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TTC31Q49AM3 519 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ZNF776Q68DI1 518 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CARNMT1Q8N4J0 409 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 KDF1Q8NAX2 398 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 SNX19Q92543 992 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 MRGPRX3Q96LB0 322 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 RSPH9Q9H1X1 276 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 MTG2Q9H4K7 406 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 IL21RQ9HBE5 538 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 POPDC2Q9HBU9 364 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 KIAA1468Q9P260 1216 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TJP2Q9UDY2 1190 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 KLK13Q9UKR3 277 aa17.24■□□□□ 0.35
CDK5RAP3-206ENST00000578018 H0Y626 953 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CAPN9O14815 690 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 LUC7L3O95232 432 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TRIM16O95361 564 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CER1O95813 267 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TRUB2O95900 331 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 APOEP02649 317 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ASLP04424 464 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ZNF883P0CG24 379 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 SLC9A1P19634 815 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 YWHAZP63104 245 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 APBA1Q02410 837 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ZNF423Q2M1K9 1284 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 HNRNPA1L2Q32P51 320 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 DCAF6Q58WW2 860 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 FSCBQ5H9T9 825 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 PITRM1Q5JRX3 1037 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 MMS22LQ6ZRQ5 1243 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CFAP52Q8N1V2 620 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 FAM81BQ96LP2 452 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 BTBD1Q9H0C5 482 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 THAP9Q9H5L6 903 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 GAREM1Q9H706 876 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 SUN2Q9UH99 717 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ZMIZ1Q9ULJ6 1067 aa17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 FNDC3AQ9Y2H6 1198 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TMEM8BA6NDV4 472 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 SIN3BO75182 1162 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 MATKP42679 507 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 AFF3P51826 1226 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ST8SIA6P61647 398 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 EIF4EBP2Q13542 120 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ARID5BQ14865 1188 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TRIP6Q15654 476 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ZC3H12AQ5D1E8 599 aaKnown RBP17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 RAP1GAP2Q684P5 730 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 IL27RAQ6UWB1 636 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 RAB44Q7Z6P3 723 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CHSY1Q86X52 802 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 LGI2Q8N0V4 545 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 KDM1BQ8NB78 822 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 SHC3Q92529 594 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 BIRC7Q96CA5 298 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 BTN2A3PQ96KV6 586 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 OSGEPQ9NPF4 335 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 APEX2Q9UBZ4 518 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 MSRB2Q9Y3D2 182 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 PLXNA2O75051 1894 aa17.22■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ITIH6Q6UXX5 1313 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 A0A1B0GVT2 93 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 GTPBP10A4D1E9 387 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CBFA2T3O75081 653 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TACR2P21452 398 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CTSOP43234 321 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CSNK1EP49674 416 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 UBE2HP62256 183 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TAF5Q15542 800 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CAMK4Q16566 473 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ARHGAP44Q17R89 818 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 HLA-BQ31612 363 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 GBP6Q6ZN66 633 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 USP30Q70CQ3 517 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 IRF2BP1Q8IU81 584 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CCDC117Q8IWD4 279 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 DHX40Q8IX18 779 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CHCHD4Q8N4Q1 142 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 WDTC1Q8N5D0 677 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 CPXM1Q96SM3 734 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 PABPC3Q9H361 631 aaKnown RBP17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 SGK2Q9HBY8 427 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 TM7SF3Q9NS93 570 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 PCOLCE2Q9UKZ9 415 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 ERVW-1Q9UQF0 538 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 DMXL2Q8TDJ6 3036 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 FREM2Q5SZK8 3169 aa17.21■□□□□ 0.35
CDK5RAP3-206ENST00000578018 FAM221BA6H8Z2 402 aa17.2■□□□□ 0.34
CDK5RAP3-206ENST00000578018 SRPRAP08240 638 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-206ENST00000578018 FTH1P19P0C7X4 201 aa17.2■□□□□ 0.34
CDK5RAP3-206ENST00000578018 RDXP35241 583 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-206ENST00000578018 USP8P40818 1118 aa17.2■□□□□ 0.34
CDK5RAP3-206ENST00000578018 GRIA4P48058 902 aa17.2■□□□□ 0.34
CDK5RAP3-206ENST00000578018 EXOC3L4Q17RC7 722 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms