RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SYNCRIPO60506 623 aaKnown RBP16.64■□□□□ 0.25
VAPA-204ENST00000577901 LTFP02788 710 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 STAT1P42224 750 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 COL9A2Q14055 689 aaPredicted RBP16.64■□□□□ 0.25
VAPA-204ENST00000577901 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 TMPRSS6Q8IU80 811 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 FMNL3Q8IVF7 1028 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 WDTC1Q8N5D0 677 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 TMEM35BQ8NCS4 154 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 CLEC4CQ8WTT0 213 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 UCMAQ8WVF2 138 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 FAM149B1Q96BN6 582 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 PLD4Q96BZ4 506 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 PIWIL1Q96J94 861 aaKnown RBP16.64■□□□□ 0.25
VAPA-204ENST00000577901 MIR1-1HGQ9H1L0 117 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 NLRC4Q9NPP4 1024 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 SFMBT1Q9UHJ3 866 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 CYTH4Q9UIA0 394 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 AGO1Q9UL18 857 aaKnown RBP16.64■□□□□ 0.25
VAPA-204ENST00000577901 LHX6Q9UPM6 363 aa16.64■□□□□ 0.25
VAPA-204ENST00000577901 HBS1LQ9Y450 684 aaKnown RBP16.64■□□□□ 0.25
VAPA-204ENST00000577901 GOLGA6L19H0YKK7 550 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 CAPN9O14815 690 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 SERPINC1P01008 464 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 CYBBP04839 570 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 FTH1P19P0C7X4 201 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 OXTRP30559 389 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 SOX5P35711 763 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 HARS2P49590 506 aaKnown RBP16.63■□□□□ 0.25
VAPA-204ENST00000577901 TPMTP51580 245 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 E2F5Q15329 346 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 BEND5Q7L4P6 421 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 ANKS1BQ7Z6G8 1248 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 ZNF677Q86XU0 584 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 DENND1CQ8IV53 801 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 ZCCHC9Q8N567 271 aaKnown RBP16.63■□□□□ 0.25
VAPA-204ENST00000577901 PNPLA1Q8N8W4 532 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 ADAMTS14Q8WXS8 1223 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 PRCCQ92733 491 aaPredicted RBP16.63■□□□□ 0.25
VAPA-204ENST00000577901 SIPA1Q96FS4 1042 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 SYNCQ9H7C4 482 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
VAPA-204ENST00000577901 ELOVL2Q9NXB9 296 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 PCNX2A6NKB5 2137 aa16.63■□□□□ 0.25
VAPA-204ENST00000577901 CACNA1EQ15878 2313 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 TAF4O00268 1085 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 EPHB6O15197 1021 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 PAPSS1O43252 624 aaPredicted RBP16.62■□□□□ 0.25
VAPA-204ENST00000577901 GFPT2O94808 682 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 CAPNS1P04632 268 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 JAM2P57087 298 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 YWHAZP63104 245 aaKnown RBP16.62■□□□□ 0.25
VAPA-204ENST00000577901 ZNF234Q14588 700 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 EIF4HQ15056 248 aaKnown RBP16.62■□□□□ 0.25
VAPA-204ENST00000577901 TRIP4Q15650 581 aaPredicted RBP16.62■□□□□ 0.25
VAPA-204ENST00000577901 EFHC1Q5JVL4 640 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 DCAF12L1Q5VU92 463 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 MSANTD2Q6P1R3 559 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 LUZP1Q86V48 1076 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 C1orf131Q8NDD1 294 aaKnown RBP16.62■□□□□ 0.25
VAPA-204ENST00000577901 CPXM1Q96SM3 734 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 CIPCQ9C0C6 399 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 IL21RQ9HBE5 538 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 CLEC4EQ9ULY5 219 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 PKD1L2Q7Z442 2459 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 ITPR1Q14643 2758 aa16.62■□□□□ 0.25
VAPA-204ENST00000577901 METTL12A8MUP2 240 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 BCAT2O15382 392 aaPredicted RBP16.61■□□□□ 0.25
VAPA-204ENST00000577901 IGLV3-19P01714 112 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 GLI1P08151 1106 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 ACADMP11310 421 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 PRKCHP24723 683 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 COPAP53621 1224 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 SCAPQ12770 1279 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 TAF3Q5VWG9 929 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 NOP9Q86U38 636 aaKnown RBP16.61■□□□□ 0.25
VAPA-204ENST00000577901 PROSER1Q86XN7 944 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 CACUL1Q86Y37 369 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 ZDHHC17Q8IUH5 632 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 CPXM2Q8N436 756 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 DDI1Q8WTU0 396 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 SORCS1Q8WY21 1168 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 NUP58Q9BVL2 599 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 GAREM1Q9H706 876 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 POPDC2Q9HBU9 364 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 PCOLCE2Q9UKZ9 415 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 NAALADL1Q9UQQ1 740 aa16.61■□□□□ 0.25
VAPA-204ENST00000577901 APOBEC2Q9Y235 224 aaKnown RBP16.61■□□□□ 0.25
VAPA-204ENST00000577901 ZFYVE26Q68DK2 2539 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 TEX33O43247 280 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 TIMM44O43615 452 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 CBFA2T3O75081 653 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
VAPA-204ENST00000577901 FYNP06241 537 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 EPHX1P07099 455 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 CCDC172P0C7W6 258 aa16.6■□□□□ 0.25
VAPA-204ENST00000577901 CDH5P33151 784 aaPredicted RBP16.6■□□□□ 0.25
VAPA-204ENST00000577901 CDR2Q01850 454 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms