RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TOP1MTQ969P6 601 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 PAGE5Q96GU1 130 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 CGREF1Q99674 301 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 ACAD9Q9H845 621 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 POMCP01189 267 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 MSR1P21757 451 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 SLC26A3P40879 764 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 MMP13P45452 471 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 LRRC63Q05C16 580 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 FMR1Q06787 632 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDH8-203ENST00000577390 MAD2L1BPQ15013 274 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 TTC39BQ5VTQ0 682 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 LLGL2Q6P1M3 1020 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 RERGQ96A58 199 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 CMTM5Q96DZ9 223 aa9.03□□□□□ -0.96
CDH8-203ENST00000577390 WDR12Q9GZL7 423 aaKnown RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 CHORDC1Q9UHD1 332 aaPredicted RBP9.03□□□□□ -0.96
CDH8-203ENST00000577390 TET3O43151 1660 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 H3BN98 237 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 PQBP1O60828 265 aaKnown RBP9.02□□□□□ -0.96
CDH8-203ENST00000577390 APRTP07741 180 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 USP17L8P0C7I0 530 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 GNA15P30679 374 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 CDH6P55285 790 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 SRP54P61011 504 aaKnown RBP9.02□□□□□ -0.96
CDH8-203ENST00000577390 FAM196AQ6ZSG2 479 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 CYP4V2Q6ZWL3 525 aaPredicted RBP9.02□□□□□ -0.96
CDH8-203ENST00000577390 NET1Q7Z628 596 aaPredicted RBP9.02□□□□□ -0.96
CDH8-203ENST00000577390 ZNF527Q8NB42 609 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 CATSPERBQ9H7T0 1116 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 KIAA0556O60303 1618 aa9.02□□□□□ -0.96
CDH8-203ENST00000577390 AVILO75366 819 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 B3GALNT1O75752 331 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 PLEKHO2Q8TD55 490 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 KLHL32Q96NJ5 620 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 TASP1Q9H6P5 420 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 MARCH7Q9H992 704 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 C8orf4Q9NR00 106 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 RNF112Q9ULX5 631 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 GIMD1P0DJR0 217 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 MYL12AP19105 171 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 SLC9A3P48764 834 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 CDKL3Q8IVW4 592 aaPredicted RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 ZCCHC7Q8N3Z6 543 aaKnown RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 KBTBD7Q8WVZ9 684 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 IRGQQ8WZA9 623 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 KCNK16Q96T55 309 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ABCC1P33527 1531 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 TRIM24O15164 1050 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 NR2F1P10589 423 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ACTR2P61160 394 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ECH1Q13011 328 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 NIPAL1Q6NVV3 410 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 CREG2Q8IUH2 290 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 LDAHQ9H6V9 325 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 PI4KBQ9UBF8 816 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 MYRFQ9Y2G1 1151 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 C5orf60A6NFR6 353 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 TMEM114B3SHH9 223 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ALDH3A2P51648 485 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 JAK3P52333 1124 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 KCNQ4P56696 695 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 TPD52L3Q96J77 140 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 VPS45Q9NRW7 570 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 RBMX2Q9Y388 322 aaKnown RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 CDK12Q9NYV4 1490 aaPredicted RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 BICRAQ9NZM4 1560 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 KNL1Q8NG31 2342 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 MIF4GDA9UHW6 222 aaKnown RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 SCO1O75880 301 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 RGS20O76081 388 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ITGALP20701 1170 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 THPOP40225 353 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ATXN1P54253 815 aaKnown RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 OTUD4Q01804 1114 aaKnown RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 GALNT6Q8NCL4 622 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 FAM136AQ96C01 138 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 HAVCR1Q96D42 359 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 FBXO40Q9UH90 709 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 KIF13BQ9NQT8 1826 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ZNF879B4DU55 563 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 PABPC4LP0CB38 370 aaKnown RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 CYP2C9P11712 490 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 SLC11A2P49281 568 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 EPHB3P54753 998 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 CTSWP56202 376 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 SATL1Q86VE3 508 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 IPMKQ8NFU5 416 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 EPS8L3Q8TE67 593 aaKnown RBP9.02□□□□□ -0.97
CDH8-203ENST00000577390 RBBP8Q99708 897 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDH8-203ENST00000577390 CRYL1Q9Y2S2 319 aa9.02□□□□□ -0.97
CDH8-203ENST00000577390 ITGA4P13612 1032 aa9.01□□□□□ -0.97
CDH8-203ENST00000577390 CCT3P49368 545 aaKnown RBP9.01□□□□□ -0.97
CDH8-203ENST00000577390 FOXP4Q8IVH2 680 aaPredicted RBP9.01□□□□□ -0.97
CDH8-203ENST00000577390 ARHGEF19Q8IW93 802 aa9.01□□□□□ -0.97
CDH8-203ENST00000577390 CENPLQ8N0S6 344 aaPredicted RBP9.01□□□□□ -0.97
CDH8-203ENST00000577390 BLOC1S5Q8TDH9 187 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms