RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 A0A1W2PQF6 199 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 ZNF217O75362 1048 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 ADCY5O95622 1261 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 ASLP04424 464 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 DLDP09622 509 aaKnown RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 CHRM1P11229 460 aaPredicted RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 HLA-EP13747 358 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 NDUFV2P19404 249 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 TFE3P19532 575 aaPredicted RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 CXCR3P49682 368 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 OXCT1P55809 520 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 CREB5Q02930 508 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 ZNF177Q13360 481 aaPredicted RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 AUHQ13825 339 aaKnown RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 FUT11Q495W5 492 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 PITRM1Q5JRX3 1037 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 TMEM215Q68D42 235 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 FBXL22Q6P050 247 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 DCUN1D2Q6PH85 259 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 LPCAT2Q7L5N7 544 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 FAM131BQ86XD5 332 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 PHF13Q86YI8 300 aaPredicted RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 CCAR2Q8N163 923 aaKnown RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 RXFP2Q8WXD0 754 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 BAP1Q92560 729 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 MYEOVQ96EZ4 313 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 LOXL4Q96JB6 756 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 PPP1R9BQ96SB3 815 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 ARRDC1-AS1Q9H2J1 176 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 PRDM16Q9HAZ2 1276 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 TMEM59LQ9UK28 342 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 HS3ST4Q9Y661 456 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 MYO18AQ92614 2054 aaKnown RBP15.75■□□□□ 0.11
SMG6-220ENST00000576218 GPR179Q6PRD1 2367 aa15.75■□□□□ 0.11
SMG6-220ENST00000576218 CBFA2T2O43439 604 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 NDUFS2O75306 463 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 GJB6O95452 261 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 PRKCHP24723 683 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 NNMTP40261 264 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 CSKP41240 450 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 EIF4EBP2Q13542 120 aaPredicted RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 ACBD5Q5T8D3 534 aaPredicted RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 OTUD1Q5VV17 481 aaPredicted RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 ACAD10Q6JQN1 1059 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 ARMCX6Q7L4S7 300 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 ARCQ7LC44 396 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 CYP2U1Q7Z449 544 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 ADIPOR2Q86V24 386 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 VPS36Q86VN1 386 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 ZNF366Q8N895 744 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 C12orf50Q8NA57 414 aaPredicted RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 C3orf20Q8ND61 904 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 CPLX3Q8WVH0 158 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 PRCCQ92733 491 aaPredicted RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 IQCDQ96DY2 449 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 PGAP3Q96FM1 320 aaPredicted RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 PRMT1Q99873 361 aaKnown RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 EDEM3Q9BZQ6 932 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 DUSP15Q9H1R2 295 aaPredicted RBP15.74■□□□□ 0.11
SMG6-220ENST00000576218 SLC6A17Q9H1V8 727 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 HAUS4Q9H6D7 363 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 ARHGEF38Q9NXL2 777 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 CYP8B1Q9UNU6 501 aa15.74■□□□□ 0.11
SMG6-220ENST00000576218 AP5Z1O43299 807 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 SRGAP2O75044 1071 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 LRP3O75074 770 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 CLDN11O75508 207 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 EPN2O95208 641 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 GPD1P21695 349 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 BCKDHBP21953 392 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 P2RY2P41231 377 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 NUMBP49757 651 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 ATXN1P54253 815 aaKnown RBP15.73■□□□□ 0.11
SMG6-220ENST00000576218 RPL6Q02878 288 aaKnown RBP15.73■□□□□ 0.11
SMG6-220ENST00000576218 LMNB2Q03252 620 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 SLC12A1Q13621 1099 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 C15orf59Q2T9L4 293 aaPredicted RBP15.73■□□□□ 0.11
SMG6-220ENST00000576218 FSCBQ5H9T9 825 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 SLC36A4Q6YBV0 504 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 MON1BQ7L1V2 547 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 IRF2BP2Q7Z5L9 587 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 RNF214Q8ND24 703 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 JOSD2Q8TAC2 188 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 IGSF8Q969P0 613 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 NT5C3BQ969T7 300 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 SIPA1Q96FS4 1042 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 ZC3H10Q96K80 434 aaKnown RBP15.73■□□□□ 0.11
SMG6-220ENST00000576218 MRGPRX1Q96LB2 322 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 MCEEQ96PE7 176 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMG6-220ENST00000576218 MUC3BQ9H195 1237 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 SEMA4GQ9NTN9 838 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 SUN2Q9UH99 717 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 VPS28Q9UK41 221 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 OTOGLQ3ZCN5 2332 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 USP34Q70CQ2 3546 aa15.73■□□□□ 0.11
SMG6-220ENST00000576218 GVINP1Q7Z2Y8 2422 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms