RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 GSTA2P09210 222 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 SP3Q02447 781 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 FAM26DQ5JW98 314 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 C10orf82Q8WW14 230 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 SIK2Q9H0K1 926 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 MANSC1Q9H8J5 431 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 TRIM33Q9UPN9 1127 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 CHKBQ9Y259 395 aa24.3■■□□□ 1.48
NPLOC4-217ENST00000574897 ZBTB24O43167 697 aaPredicted RBP24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 SRGAP2BP0DMP2 458 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 BGNP21810 368 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 CDK16Q00536 496 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 BNIP1Q12981 228 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 PLEKHG4Q58EX7 1191 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 CLLU1OSQ5K130 101 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 OR52K1Q8NGK4 314 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 MECRQ9BV79 373 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 VPS11Q9H270 941 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 EIF2B3Q9NR50 452 aaKnown RBP24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 MSI1O43347 362 aaKnown RBP24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 F9P00740 461 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 MLNP12872 115 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 SLC5A3P53794 718 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 PPIDQ08752 370 aaKnown RBP24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 STEAP4Q687X5 459 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 DCLRE1AQ6PJP8 1040 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 TRAF7Q6Q0C0 670 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 TBC1D1Q86TI0 1168 aaPredicted RBP24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 SMC1BQ8NDV3 1235 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 IRGQQ8WZA9 623 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 MYLK2Q9H1R3 596 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 PCMTD2Q9NV79 361 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 IGSF9Q9P2J2 1179 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 SFMBT1Q9UHJ3 866 aa24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 MAGED2Q9UNF1 606 aaPredicted RBP24.29■■□□□ 1.48
NPLOC4-217ENST00000574897 F7P08709 466 aaPredicted RBP24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 CD68P34810 354 aaPredicted RBP24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 HCAR3P49019 387 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 SDHAF4Q5VUM1 108 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 RRN3Q9NYV6 651 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 DSEQ9UL01 958 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 PSAT1Q9Y617 370 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 GRIK1P39086 918 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 KCNJ2P63252 427 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 TSPY1Q01534 308 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 YWHAHQ04917 246 aaPredicted RBP24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 CRYMQ14894 314 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 RNF180Q86T96 592 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 THEM5Q8N1Q8 247 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 RFWD2Q8NHY2 731 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 EPAS1Q99814 870 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 FERMT1Q9BQL6 677 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 PLCD4Q9BRC7 762 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 KLC4Q9NSK0 619 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 DCTN4Q9UJW0 460 aa24.28■■□□□ 1.48
NPLOC4-217ENST00000574897 CYB5D1Q6P9G0 228 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 SPATA2LQ8IUW3 424 aaPredicted RBP24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 KIF2BQ8N4N8 673 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 APOL2Q9BQE5 337 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 DNAJB4Q9UDY4 337 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 ALDH1A1P00352 501 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 GARSP41250 739 aaKnown RBP24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 SERPINB4P48594 390 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 SLC39A12Q504Y0 691 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 RWDD4Q6NW29 188 aaKnown RBP24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 ARHGAP36Q6ZRI8 547 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 SCN4BQ8IWT1 228 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 CD99L2Q8TCZ2 262 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 ERP27Q96DN0 273 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 UROC1Q96N76 676 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 RGS18Q9NS28 235 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 UBP1Q9NZI7 540 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 KANSL3Q9P2N6 904 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 NEU3Q9UQ49 428 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 PRG3Q9Y2Y8 225 aaPredicted RBP24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 USH1CQ9Y6N9 552 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 NUMBLQ9Y6R0 609 aa24.27■■□□□ 1.48
NPLOC4-217ENST00000574897 NYNRINQ9P2P1 1898 aaKnown RBP24.27■■□□□ 1.47
NPLOC4-217ENST00000574897 KRT38O76015 456 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 ALDH1A2O94788 518 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 CCNFP41002 786 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 NIPAL4Q0D2K0 466 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 GALNT2Q10471 571 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 PDZD4Q76G19 769 aaPredicted RBP24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 ARMC2Q8NEN0 867 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 CASP10Q92851 521 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 MLPHQ9BV36 600 aaPredicted RBP24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 IQCGQ9H095 443 aaKnown RBP24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 NMUR1Q9HB89 426 aa24.26■■□□□ 1.47
NPLOC4-217ENST00000574897 TNFRSF10BO14763 440 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 IGLV3-25P01717 112 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 NEFHP12036 1026 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 GPR15P49685 360 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 LGSNQ5TDP6 509 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 SCD5Q86SK9 330 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 USP33Q8TEY7 942 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 HDAC11Q96DB2 347 aa24.25■■□□□ 1.47
NPLOC4-217ENST00000574897 FCRL3Q96P31 734 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms