RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 CCDC188H7C350 402 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 PHF2O75151 1096 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 LATS1O95835 1130 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 ZFXP17010 805 aaPredicted RBP24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 TGM2P21980 687 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 VCPP55072 806 aaKnown RBP24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 TMCO3Q6UWJ1 677 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 CIR1Q86X95 450 aaPredicted RBP24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 BBS7Q8IWZ6 715 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 NETO2Q8NC67 525 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 MAGOHBQ96A72 148 aaKnown RBP24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 PRICKLE1Q96MT3 831 aaPredicted RBP24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 STOML2Q9UJZ1 356 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 IGLV3-10A0A075B6K4 115 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 MFSD11O43934 449 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 CCDC85BQ15834 202 aaPredicted RBP24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 CYP1B1Q16678 543 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 TTC27Q6P3X3 843 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 CFAP52Q8N1V2 620 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 CCDC33Q8N5R6 958 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 P3H4Q92791 437 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 ZYG11BQ9C0D3 744 aa24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 PPARGC1AQ9UBK2 798 aaKnown RBP24.77■■□□□ 1.56
ATPAF1-213ENST00000574428 FGF10O15520 208 aaPredicted RBP24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 TSPAN3O60637 253 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 CNTN5O94779 1100 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 SGSHP51688 502 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 ALFQ53S48 1182 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 FAM78AQ5JUQ0 283 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 NPWQ8N729 165 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 C12orf50Q8NA57 414 aaPredicted RBP24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 RIPOR3Q96MK2 946 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 CATSPERBQ9H7T0 1116 aa24.76■■□□□ 1.55
ATPAF1-213ENST00000574428 NUP210Q8TEM1 1887 aaPredicted RBP24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 LIASO43766 372 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 MRPS25P82663 173 aaKnown RBP24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 SLC10A2Q12908 348 aaPredicted RBP24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 USP4Q13107 963 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 ZNF77Q15935 545 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 CCNG2Q16589 344 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 KCTD19Q17RG1 926 aaPredicted RBP24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 TFAP2DQ7Z6R9 452 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 TTC13Q8NBP0 860 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 DDX50Q9BQ39 737 aaKnown RBP24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 PRDM16Q9HAZ2 1276 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 GDE1Q9NZC3 331 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 E2F8A0AVK6 867 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 DRGXA6NNA5 263 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 KCNJ1P48048 391 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 PAFAH1B3Q15102 231 aaKnown RBP24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 SMRP1Q8NCR6 262 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 UBXN4Q92575 508 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 ASB16Q96NS5 453 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 LRRC19Q9H756 370 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 HOMER3Q9NSC5 361 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 NDFIP2Q9NV92 336 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 DTLQ9NZJ0 730 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 DNPEPQ9ULA0 475 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 CDH7Q9ULB5 785 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 ZNF510Q9Y2H8 683 aa24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 ZFP37Q9Y6Q3 630 aaPredicted RBP24.75■■□□□ 1.55
ATPAF1-213ENST00000574428 H3BQ06 376 aaPredicted RBP24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 RHOQP17081 205 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 CHRNA3P32297 505 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 VIPR2P41587 438 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 RPS24P62847 133 aaKnown RBP24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 NOMO1Q15155 1222 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 RABGAP1LQ5R372 815 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 TEX35Q5T0J7 233 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 B4GALNT4Q76KP1 1039 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 NLRP14Q86W24 1093 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 TP53INP2Q8IXH6 220 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 FAM217AQ8IXS0 508 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 MMGT1Q8N4V1 131 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 RTL3Q8N8U3 475 aaKnown RBP24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 ST13P5Q8NFI4 369 aaPredicted RBP24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 RSPRY1Q96DX4 576 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 GUCD1Q96NT3 240 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 POMKQ9H5K3 350 aa24.74■■□□□ 1.55
ATPAF1-213ENST00000574428 XIRP2A4UGR9 3374 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 WEE1P30291 646 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 COILP38432 576 aaPredicted RBP24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 MTHFRP42898 656 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 EIF3EP60228 445 aaKnown RBP24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 C5orf22Q49AR2 442 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 CCDC137Q6PK04 289 aaKnown RBP24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 ZC3H18Q86VM9 953 aaKnown RBP24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 DEFB123Q8N688 67 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 CELF5Q8N6W0 485 aaKnown RBP24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 SLC35B2Q8TB61 432 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 LRRN4Q8WUT4 740 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 SMARCD2Q92925 531 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 LRRC3BQ96PB8 259 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 MYADMQ96S97 322 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 AMACRQ9UHK6 382 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 CD207Q9UJ71 328 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 C5orf42Q9H799 3197 aa24.73■■□□□ 1.55
ATPAF1-213ENST00000574428 MCF2LO15068 1137 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 NR2C2P49116 596 aa24.72■■□□□ 1.55
ATPAF1-213ENST00000574428 BYSLQ13895 437 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms