RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 OR12D3Q9UGF7 316 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 ANAPC7Q9UJX3 599 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 STARD13Q9Y3M8 1113 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 CACNA1IQ9P0X4 2223 aa13.18□□□□□ -0.3
TRAPPC1-206ENST00000573989 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 EIF3CLB5ME19 914 aaKnown RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 E9PAM4 449 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 SRGAP2O75044 1071 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 PABPC1P11940 636 aaKnown RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 CXCL12P48061 93 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 SGSHP51688 502 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 NRG1Q02297 640 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 SCAPQ12770 1279 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 ZNF177Q13360 481 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 SLC12A1Q13621 1099 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 DMC1Q14565 340 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 Q6ZS52 159 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 CFAP52Q8N1V2 620 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 USP33Q8TEY7 942 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 EIF3CQ99613 913 aaKnown RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 BAG1Q99933 345 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 ABCB8Q9NUT2 735 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 GGA2Q9UJY4 613 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 FBXO4Q9UKT5 387 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 SLC8A2Q9UPR5 921 aa13.17□□□□□ -0.3
TRAPPC1-206ENST00000573989 TRIM24O15164 1050 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ZBTB24O43167 697 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 NRDCO43847 1150 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 LCA5LO95447 670 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ATP5BP06576 529 aaKnown RBP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 POLR2EP19388 210 aaKnown RBP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 HLA-FP30511 346 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 PCK1P35558 622 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 TIE1P35590 1138 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 MAGEA1P43355 309 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 NRLP54845 237 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 OGDHQ02218 1023 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 SYT13Q7L8C5 426 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 NIPA2Q8N8Q9 360 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 EZH1Q92800 747 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 IGSF8Q969P0 613 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ARHGEF26Q96DR7 871 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 EPAS1Q99814 870 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 CIPCQ9C0C6 399 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ZYG11BQ9C0D3 744 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ANLNQ9NQW6 1124 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 ELOVL2Q9NXB9 296 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 PPARGC1AQ9UBK2 798 aaKnown RBP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 FZD10Q9ULW2 581 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 CLEC4EQ9ULY5 219 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC1-206ENST00000573989 IGLV3-10A0A075B6K4 115 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 DRGXA6NNA5 263 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 PRRT4C9JH25 899 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 NDUFA10O95299 355 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 PAPSS2O95340 614 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 ASLP04424 464 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 FECHP22830 423 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 NTSR1P30989 418 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 L1CAMP32004 1257 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 HTR7P34969 479 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 GGCXP38435 758 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 KIR2DL1P43626 348 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 ZNF135P52742 658 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 PTPN5P54829 565 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 SULT2A1Q06520 285 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 MESP2Q0VG99 397 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 GEN1Q17RS7 908 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 C6orf118Q5T5N4 469 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 RWDD4Q6NW29 188 aaKnown RBP13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 C14orf80Q86SX3 495 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 SETD3Q86TU7 594 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 CHPFQ8IZ52 775 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 CAMKK1Q8N5S9 505 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 RFFLQ8WZ73 363 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 P2RY11Q96G91 374 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 PACSIN1Q9BY11 444 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 TMPRSS4Q9NRS4 437 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 MMP17Q9ULZ9 603 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 USP18Q9UMW8 372 aa13.15□□□□□ -0.3
TRAPPC1-206ENST00000573989 SOWAHDA6NJG2 315 aa13.14□□□□□ -0.31
TRAPPC1-206ENST00000573989 I6L893 689 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms