RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 UBR7Q8N806 425 aa12.54□□□□□ -0.4
TRIM25-207ENST00000573108 LMO3Q8TAP4 145 aa12.54□□□□□ -0.4
TRIM25-207ENST00000573108 MYO19Q96H55 970 aa12.54□□□□□ -0.4
TRIM25-207ENST00000573108 BBC3Q96PG8 261 aaPredicted RBP12.54□□□□□ -0.4
TRIM25-207ENST00000573108 OSGEPQ9NPF4 335 aa12.54□□□□□ -0.4
TRIM25-207ENST00000573108 ABCC13Q9NSE7 274 aa12.54□□□□□ -0.4
TRIM25-207ENST00000573108 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
TRIM25-207ENST00000573108 GOLGA4Q13439 2230 aaKnown RBP12.54□□□□□ -0.4
TRIM25-207ENST00000573108 NYNRINQ9P2P1 1898 aaKnown RBP12.53□□□□□ -0.4
TRIM25-207ENST00000573108 O00370 1275 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 TNFSF14O43557 240 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 FGFR1OPO95684 399 aaKnown RBP12.53□□□□□ -0.4
TRIM25-207ENST00000573108 LATS1O95835 1130 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 GNA14O95837 355 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 IGHV4-34P06331 123 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 CD27P26842 260 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 RGS7P49802 495 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 CCT8P50990 548 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 ZNF445P59923 1031 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 ZBTB16Q05516 673 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 PKDCCQ504Y2 493 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 FAM133BQ5BKY9 247 aaKnown RBP12.53□□□□□ -0.4
TRIM25-207ENST00000573108 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 PIK3R6Q5UE93 754 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 CLEC4CQ8WTT0 213 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 TFAP2BQ92481 460 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 IGSF8Q969P0 613 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 MYEOVQ96EZ4 313 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 CRELD1Q96HD1 420 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 LRIG1Q96JA1 1093 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 LMLNQ96KR4 655 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 FBRSQ9HAH7 460 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 SGK2Q9HBY8 427 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 STIM2Q9P246 746 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 SERGEFQ9UGK8 458 aa12.53□□□□□ -0.4
TRIM25-207ENST00000573108 FAM47DPA6NHR8 397 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 CALCAP01258 141 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 IGLV3-27P01718 113 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 VDRP11473 427 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 GRK6P43250 576 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 TTC31Q49AM3 519 aaPredicted RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 ZNF776Q68DI1 518 aaPredicted RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 KIAA0895LQ68EN5 471 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 NADSYN1Q6IA69 706 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 PMF1Q6P1K2 205 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 MSANTD2Q6P1R3 559 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 DHRS13Q6UX07 377 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 CREBRFQ8IUR6 639 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 PRICKLE1Q96MT3 831 aaPredicted RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 SLC6A18Q96N87 628 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 ZSWIM1Q9BR11 485 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 RSPH9Q9H1X1 276 aaPredicted RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 PABPC3Q9H361 631 aaKnown RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 EBF2Q9HAK2 575 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 CNGB3Q9NQW8 809 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 DKK4Q9UBT3 224 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 SUN2Q9UH99 717 aa12.52□□□□□ -0.41
TRIM25-207ENST00000573108 INTS6Q9UL03 887 aaKnown RBP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRIM25-207ENST00000573108 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 CBX4O00257 560 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 P4HA2O15460 535 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 ACSL4O60488 711 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 SIN3BO75182 1162 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 WNT1P04628 370 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 CSKP41240 450 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 GALCP54803 685 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 CLDN6P56747 220 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 SMAD1Q15797 465 aaKnown RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 LCLAT1Q6UWP7 414 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 MMS22LQ6ZRQ5 1243 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 RBM43Q6ZSC3 357 aaKnown RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 MFN1Q8IWA4 741 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 DHX40Q8IX18 779 aaKnown RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 SCML4Q8N228 414 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 GANCQ8TET4 914 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 SLC35F5Q8WV83 523 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 GOLGA1Q92805 767 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 KAT5Q92993 513 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 TTC17Q96AE7 1141 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 MRGPRX3Q96LB0 322 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 SCUBE2Q9NQ36 999 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 FBXL12Q9NXK8 326 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 SETXQ7Z333 2677 aaKnown RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 KALRNO60229 2985 aa12.51□□□□□ -0.41
TRIM25-207ENST00000573108 COL5A1P20908 1838 aaPredicted RBP12.51□□□□□ -0.41
TRIM25-207ENST00000573108 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
TRIM25-207ENST00000573108 A0A1W2PP55 124 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms