RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CNOT6Q9ULM6 557 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 USP18Q9UMW8 372 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SUFUQ9UMX1 484 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 GDAQ9Y2T3 454 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC4A4Q9Y6R1 1079 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 KIF7Q2M1P5 1343 aa5.22□□□□□ -1.57
TOPBP1-210ENST00000572787 LOC100289279A0A1B0GTE1 492 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 GOLGA6L7A0A1B0GV03 622 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM237BA0A1B0GVD1 139 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM90A20PA6NIJ5 464 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SOBPA7XYQ1 873 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 KRIT1O00522 736 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CASC3O15234 703 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 NUDT21O43809 227 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 NRP2O60462 931 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 RECQL4O94761 1208 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 PCDH8O95206 1070 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 OR2C1O95371 312 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 DIRAS3O95661 229 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 C4BPAP04003 597 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 S100A6P06703 90 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CELA3BP08861 270 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ETS1P14921 441 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CD33P20138 364 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 GLRA2P23416 452 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 PRKCHP24723 683 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ACVR2AP27037 513 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC5A2P31639 672 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ICAM3P32942 547 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 BMP8BP34820 402 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC15A1P46059 708 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 VPS41P49754 854 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 WNT3P56703 355 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ASIC1P78348 528 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CTAG1AP78358 180 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CD83Q01151 205 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ROM1Q03395 351 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 EXOSC9Q06265 439 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 TDGQ13569 410 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 THOC5Q13769 683 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 DOC2AQ14183 400 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC29A2Q14542 456 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 TTLL4Q14679 1199 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 EFTUD2Q15029 972 aaKnown RBP eCLIP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ZNF792Q3KQV3 632 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 GALNTL6Q49A17 601 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CBWD5Q5RIA9 395 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SPATA46Q5T0L3 261 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM182BQ5T319 152 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ADGRF1Q5T601 910 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 UNQ6494/PRO21346Q6UXR6 183 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 PACS1Q6VY07 963 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ZNF365Q70YC5 407 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ILDR2Q71H61 639 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 DENND6AQ8IWF6 608 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SFRP1Q8N474 314 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC15A4Q8N697 577 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 LINC00469Q8N7U9 141 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CDYL2Q8N8U2 506 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 IQUBQ8NA54 791 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 IL17RCQ8NAC3 791 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ARRDC4Q8NCT1 418 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 OR52M1Q8NGK5 317 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 PIP4K2CQ8TBX8 421 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 MDM1Q8TC05 714 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 MIPOL1Q8TD10 442 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 IP6K1Q92551 441 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 TNPO1Q92973 898 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ZKSCAN4Q969J2 545 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 RAB24Q969Q5 203 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SPSB4Q96A44 273 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ISL2Q96A47 359 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 FOXRED1Q96CU9 486 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 C11orf24Q96F05 449 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 EEF2KMTQ96G04 330 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ABHD17AQ96GS6 310 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 RBM17Q96I25 401 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CCDC77Q9BR77 488 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 THUMPD2Q9BTF0 503 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM129AQ9BZQ8 928 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 MAGEE1Q9HCI5 957 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SSU72Q9NP77 194 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC6A20Q9NP91 592 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SEMA4BQ9NPR2 832 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 FAM114A2Q9NRY5 505 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SOHLH2Q9NX45 425 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 IL20Q9NYY1 176 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CNIH4Q9P003 139 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 HCN3Q9P1Z3 774 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 LRIT1Q9P2V4 623 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 USP21Q9UK80 565 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 ZDHHC8Q9ULC8 765 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 SLC6A14Q9UN76 642 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 MINPP1Q9UNW1 487 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 WASF3Q9UPY6 502 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 CNTN6Q9UQ52 1028 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 MTMR6Q9Y217 621 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 TNFSF13BQ9Y275 285 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 DLGAP4Q9Y2H0 992 aa5.21□□□□□ -1.58
TOPBP1-210ENST00000572787 KCNK7Q9Y2U2 307 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms