RNA–Protein interactions for RNA: ENST00000569615.2

UTP4-215, Transcript of UTP4, small subunit processome component, humanhuman

TSL 3

Gene UTP4, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-215ENST00000569615 ERBB2P04626 1255 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 SRPRAP08240 638 aaKnown RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 PNMA6AP0CW24 399 aaPredicted RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 PRKCHP24723 683 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 PTGER3P43115 390 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 GABRB2P47870 512 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 COPB1P53618 953 aaKnown RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 GFPT1Q06210 699 aaPredicted RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 NME3Q13232 169 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 CAMK2GQ13555 558 aaPredicted RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 TAF5Q15542 800 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 TRIM61Q5EBN2 209 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 BRMS1LQ5PSV4 323 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 FAM102AQ5T9C2 384 aaPredicted RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 TAF3Q5VWG9 929 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 TMEM215Q68D42 235 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 DPY19L2P1Q6NXN4 242 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 ARMCX6Q7L4S7 300 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 RGL4Q8IZJ4 473 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 CADM4Q8NFZ8 388 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 EPS8L1Q8TE68 723 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 SORCS1Q8WY21 1168 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 TTC17Q96AE7 1141 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 PRICKLE1Q96MT3 831 aaPredicted RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 MKRN2Q9H000 416 aaKnown RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 WDCPQ9H6R7 721 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 TMEM9BQ9NQ34 198 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 COX16Q9P0S2 106 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
UTP4-215ENST00000569615 SCML1Q9UN30 329 aa13.16□□□□□ -0.3
UTP4-215ENST00000569615 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 LNP1A1A4G5 178 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 DCDC2BA2VCK2 349 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 LRRC10BA6NIK2 292 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 IGLV3-19P01714 112 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 DNTTP04053 509 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 SYPP08247 313 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 PTMSP20962 102 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 CD70P32970 193 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 SOX5P35711 763 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 CSKP41240 450 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 TPMTP51580 245 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 SGSHP51688 502 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 RNASE9P60153 205 aaKnown RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 CDR2Q01850 454 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 UBXN1Q04323 297 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 TYRO3Q06418 890 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 ZNF177Q13360 481 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 EIF4EBP2Q13542 120 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 PEAR1Q5VY43 1037 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 SLC23A3Q6PIS1 610 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 ARCQ7LC44 396 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 CFAP52Q8N1V2 620 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 ZNF419Q96HQ0 510 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 HSPA12BQ96MM6 686 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 RPRD1AQ96P16 312 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 GANQ9H2C0 597 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
UTP4-215ENST00000569615 PILRBQ9UKJ0 227 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 SLC6A14Q9UN76 642 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 DNAH14Q0VDD8 3507 aa13.15□□□□□ -0.3
UTP4-215ENST00000569615 NUP205Q92621 2012 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 TARSL2A2RTX5 802 aaKnown RBP13.14□□□□□ -0.31
UTP4-215ENST00000569615 MEI4A8MW99 385 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 CLDN11O75508 207 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 GFPT2O94808 682 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 CFIP05156 583 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 SERPINF2P08697 491 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 DESP17661 470 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 ITPKAP23677 461 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 SULT1E1P49888 294 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 COPAP53621 1224 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 NOMO3P69849 1222 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 ECT2LQ008S8 904 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 ARID5BQ14865 1188 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 PLEKHG6Q3KR16 790 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 PITRM1Q5JRX3 1037 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
UTP4-215ENST00000569615 TCEAL6Q6IPX3 200 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
UTP4-215ENST00000569615 FRMD1Q8N878 549 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 TCEAL3Q969E4 200 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 ERLEC1Q96DZ1 483 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
UTP4-215ENST00000569615 ERGIC2Q96RQ1 377 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 BPIFA3Q9BQP9 254 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 SMOC1Q9H4F8 434 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 NLRC4Q9NPP4 1024 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 NCKAP1Q9Y2A7 1128 aa13.14□□□□□ -0.31
UTP4-215ENST00000569615 EDDM13A0A1B0GTR0 161 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms