RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SETD3Q86TU7 594 aaPredicted RBP24.18■■□□□ 1.46
RAB40C-212ENST00000569575 TMEM25Q86YD3 366 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 SUGP1Q8IWZ8 645 aaKnown RBP24.18■■□□□ 1.46
RAB40C-212ENST00000569575 RSAD2Q8WXG1 361 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 FAF2Q96CS3 445 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 KCTD15Q96SI1 283 aaPredicted RBP24.18■■□□□ 1.46
RAB40C-212ENST00000569575 EBF3Q9H4W6 596 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 HPS4Q9NQG7 708 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 TMPRSS4Q9NRS4 437 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 DUSP12Q9UNI6 340 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 DOCK4Q8N1I0 1966 aa24.18■■□□□ 1.46
RAB40C-212ENST00000569575 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.17■■□□□ 1.46
RAB40C-212ENST00000569575 CREB3O43889 395 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 CACNG3O60359 315 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 KRT1P04264 644 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 PRLRP16471 622 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 ETF1P62495 437 aaKnown RBP24.17■■□□□ 1.46
RAB40C-212ENST00000569575 SLC12A1Q13621 1099 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 DPYSL3Q14195 570 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 E2F5Q15329 346 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 TAZQ16635 292 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 CA9Q16790 459 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 TFDP3Q5H9I0 405 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 RFWD3Q6PCD5 774 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 NUDT18Q6ZVK8 323 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.17■■□□□ 1.46
RAB40C-212ENST00000569575 GJD3Q8N144 294 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 ASIC4Q96FT7 647 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 CALN1Q9BXU9 219 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 MAK16Q9BXY0 300 aaKnown RBP24.17■■□□□ 1.46
RAB40C-212ENST00000569575 TMEM248Q9NWD8 314 aa24.17■■□□□ 1.46
RAB40C-212ENST00000569575 CWC15Q9P013 229 aaKnown RBP24.17■■□□□ 1.46
RAB40C-212ENST00000569575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.16■■□□□ 1.46
RAB40C-212ENST00000569575 DDX3YO15523 660 aaKnown RBP24.16■■□□□ 1.46
RAB40C-212ENST00000569575 ETFBP38117 255 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 ZNF177Q13360 481 aaPredicted RBP24.16■■□□□ 1.46
RAB40C-212ENST00000569575 TFDP2Q14188 446 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 ANO4Q32M45 955 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 ATP13A4Q4VNC1 1196 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 C6orf118Q5T5N4 469 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 TPGS1Q6ZTW0 290 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 C14orf80Q86SX3 495 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 RALGPS2Q86X27 583 aaPredicted RBP24.16■■□□□ 1.46
RAB40C-212ENST00000569575 CPNE8Q86YQ8 564 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 PYROXD2Q8N2H3 581 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 SLC35F6Q8N357 371 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 FIBINQ8TAL6 211 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 IGSF8Q969P0 613 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 TLR10Q9BXR5 811 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 GPATCH2LQ9NWQ4 482 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 FBXO10Q9UK96 956 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 TBC1D30Q9Y2I9 924 aa24.16■■□□□ 1.46
RAB40C-212ENST00000569575 CXorf51AA0A1B0GTR3 108 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 FAM72CH0Y354 149 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 CES2O00748 559 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 TBL1XO60907 577 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 LUC7L3O95232 432 aaKnown RBP24.15■■□□□ 1.46
RAB40C-212ENST00000569575 TNNT1P13805 278 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 TYRP14679 529 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 IL4RP24394 825 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 HOXD9P28356 352 aaPredicted RBP24.15■■□□□ 1.46
RAB40C-212ENST00000569575 SERPINB6P35237 376 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 GJC1P36383 396 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 DPYSQ14117 519 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 FAM72AQ5TYM5 149 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 TRIM68Q6AZZ1 485 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 FAM72DQ6L9T8 149 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 RWDD4Q6NW29 188 aaKnown RBP24.15■■□□□ 1.46
RAB40C-212ENST00000569575 NYAP1Q6ZVC0 841 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 FAM72BQ86X60 149 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 RNF135Q8IUD6 432 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 RTL3Q8N8U3 475 aaKnown RBP24.15■■□□□ 1.46
RAB40C-212ENST00000569575 RAPGEF5Q92565 580 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 KRT35Q92764 455 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 ZFYVE19Q96K21 471 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 PBKQ96KB5 322 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 PRICKLE1Q96MT3 831 aaPredicted RBP24.15■■□□□ 1.46
RAB40C-212ENST00000569575 CSPG4P5Q96PW8 444 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 WNT16Q9UBV4 365 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 RAD54BQ9Y620 910 aa24.15■■□□□ 1.46
RAB40C-212ENST00000569575 CTAGE9A4FU28 777 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 C3orf70A6NLC5 250 aaPredicted RBP24.14■■□□□ 1.45
RAB40C-212ENST00000569575 ASGR2P07307 311 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 ARSAP15289 507 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 GOT1P17174 413 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 CDKN2BP42772 138 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 YBEYP58557 167 aaPredicted RBP24.14■■□□□ 1.45
RAB40C-212ENST00000569575 RPS24P62847 133 aaKnown RBP24.14■■□□□ 1.45
RAB40C-212ENST00000569575 DMC1Q14565 340 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 ANKRD20A8PQ5CZ79 823 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 ARTNQ5T4W7 220 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 BZW1Q7L1Q6 419 aaKnown RBP24.14■■□□□ 1.45
RAB40C-212ENST00000569575 NLRP14Q86W24 1093 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 LRRC49Q8IUZ0 686 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 RNF157Q96PX1 679 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 KIAA1522Q9P206 1035 aaPredicted RBP24.14■■□□□ 1.45
RAB40C-212ENST00000569575 SLC27A6Q9Y2P4 619 aa24.14■■□□□ 1.45
RAB40C-212ENST00000569575 NEDD8-MDP1E9PL57 170 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 SCAMP3O14828 347 aaKnown RBP24.13■■□□□ 1.45
RAB40C-212ENST00000569575 TSPAN3O60637 253 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms