RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 RNF40O75150 1001 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 PENKP01210 267 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 MCM3P25205 808 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 CCR1P32246 355 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 FLT3P36888 993 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 GRIA2P42262 883 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 PAFAH1B1P43034 410 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 SULT1E1P49888 294 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 PTPN5P54829 565 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 TCF15Q12870 199 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 PTP4A2Q12974 167 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 EIF4EBP2Q13542 120 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 GAS6Q14393 721 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 GRAMD4Q6IC98 578 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 ACAD10Q6JQN1 1059 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 MON1BQ7L1V2 547 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 PHLDB2Q86SQ0 1253 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 SPEM1Q8N4L4 309 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 EZH1Q92800 747 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 PSMB7Q99436 277 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 NPY6RQ99463 290 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 TAS2R14Q9NYV8 317 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 OGFRQ9NZT2 677 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 SLC12A6Q9UHW9 1150 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
NSMCE1-214ENST00000569236 TBC1D3BA6NDS4 549 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TMCO5BA8MYB1 307 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 H0Y858 1186 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TSPAN3O60637 253 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 ATG13O75143 517 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 RTN2O75298 545 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 ERLIN1O75477 346 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 ABCB4P21439 1286 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 DGKGP49619 791 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 CCR3P51677 355 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 GSCP56915 257 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 VSNL1P62760 191 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 MESP2Q0VG99 397 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 PPP2R5DQ14738 602 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 RPS6KA1Q15418 735 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 SLC25A52Q3SY17 297 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 FAM133BQ5BKY9 247 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 MAMSTRQ6ZN01 415 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 SND1Q7KZF4 910 aaKnown RBP eCLIP12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 RHOT2Q8IXI1 618 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 PHTF2Q8N3S3 785 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 ATP6V0D2Q8N8Y2 350 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TERB1Q8NA31 727 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 C3orf20Q8ND61 904 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 RUBCNQ92622 972 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 NT5C3BQ969T7 300 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TMA16Q96EY4 203 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 BTN2A3PQ96KV6 586 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 SELENOOQ9BVL4 669 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 THAP2Q9H0W7 228 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 IRF2BPLQ9H1B7 796 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 A0A0A0MRY4 1105 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 KCNU1A8MYU2 1149 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 K7EQS6 105 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TRIM24O15164 1050 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 F9P00740 461 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 KRT3P12035 628 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 SLC6A4P31645 630 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 CXCL12P48061 93 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 SEC13P55735 322 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 MTA1Q13330 715 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 NADSYN1Q6IA69 706 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 CCDC70Q6NSX1 233 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 RFWD3Q6PCD5 774 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 EMC1Q8N766 993 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 RPLP0P6Q8NHW5 317 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 PGAP3Q96FM1 320 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 VCPIP1Q96JH7 1222 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 CFAP57Q96MR6 1250 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TBCBQ99426 244 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 OSGEPQ9NPF4 335 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 TMEM51Q9NW97 253 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 FBXO4Q9UKT5 387 aa12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 PACSIN2Q9UNF0 486 aaPredicted RBP12.97□□□□□ -0.33
NSMCE1-214ENST00000569236 GFRA2O00451 464 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 FTLP02792 175 aaPredicted RBP12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 PDGFRAP16234 1089 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 SDC4P31431 198 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 TNFRSF4P43489 277 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 DEUP1Q05D60 604 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 C2orf27AQ580R0 203 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 PIK3R6Q5UE93 754 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 OTUD1Q5VV17 481 aaPredicted RBP12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 TRNP1Q6NT89 227 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 DNAJC24Q6P3W2 148 aa12.96□□□□□ -0.34
NSMCE1-214ENST00000569236 PEX26Q7Z412 305 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms