RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 XYLT1Q86Y38 959 aa20.84■□□□□ 0.93
ABCA3-206ENST00000569062 ZNF557Q8N988 423 aaPredicted RBP20.84■□□□□ 0.93
ABCA3-206ENST00000569062 ANKRD20A12PQ8NF67 263 aa20.84■□□□□ 0.93
ABCA3-206ENST00000569062 CPA5Q8WXQ8 436 aa20.84■□□□□ 0.93
ABCA3-206ENST00000569062 SLC12A6Q9UHW9 1150 aa20.84■□□□□ 0.93
ABCA3-206ENST00000569062 MED19A0JLT2 244 aaPredicted RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 F5H5T6 163 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 H0Y626 953 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 ATP5BP06576 529 aaKnown RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 SLC2A3P11169 496 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 ATP1A3P13637 1013 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 MATKP42679 507 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 LIMK1P53667 647 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 UBXN1Q04323 297 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 FAM102AQ5T9C2 384 aaPredicted RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 NAA35Q5VZE5 725 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 CAVIN1Q6NZI2 390 aaKnown RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 METTL3Q86U44 580 aaKnown RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 CIR1Q86X95 450 aaPredicted RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 SLC41A1Q8IVJ1 513 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 SIPA1Q96FS4 1042 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 PCMTD1Q96MG8 357 aaPredicted RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 NPY6RQ99463 290 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 ITM2CQ9NQX7 267 aa20.83■□□□□ 0.93
ABCA3-206ENST00000569062 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 USP36Q9P275 1121 aaKnown RBP20.83■□□□□ 0.93
ABCA3-206ENST00000569062 ADAMTS9Q9P2N4 1935 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 LNP1A1A4G5 178 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 KHNYNO15037 678 aaKnown RBP20.82■□□□□ 0.92
ABCA3-206ENST00000569062 LSM8O95777 96 aaKnown RBP20.82■□□□□ 0.92
ABCA3-206ENST00000569062 CHRNB2P17787 502 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 CSKP41240 450 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 SULT1E1P49888 294 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 IRX4P78413 519 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 FOXK2Q01167 660 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 FMO1Q01740 532 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 ZNF33AQ06730 810 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 CAMK2GQ13555 558 aaPredicted RBP20.82■□□□□ 0.92
ABCA3-206ENST00000569062 STPG1Q5TH74 334 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 ZNF677Q86XU0 584 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 SYT12Q8IV01 421 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 CCDC117Q8IWD4 279 aaPredicted RBP20.82■□□□□ 0.92
ABCA3-206ENST00000569062 NEK11Q8NG66 645 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 PRCCQ92733 491 aaPredicted RBP20.82■□□□□ 0.92
ABCA3-206ENST00000569062 TTC17Q96AE7 1141 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 MYO19Q96H55 970 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 SPAG5Q96R06 1193 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 EDEM2Q9BV94 578 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 PIGVQ9NUD9 493 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 PILRBQ9UKJ0 227 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 GON4LQ3T8J9 2241 aa20.82■□□□□ 0.92
ABCA3-206ENST00000569062 PI4KAP42356 2102 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 GOLGA8SH3BPF8 625 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 SCNN1AP37088 669 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 GGCXP38435 758 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 NUMBP49757 651 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 TPMTP51580 245 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 CDR2Q01850 454 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 PITRM1Q5JRX3 1037 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 FBXL22Q6P050 247 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 APCDD1Q8J025 514 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 CCAR2Q8N163 923 aaKnown RBP20.81■□□□□ 0.92
ABCA3-206ENST00000569062 OR2T3Q8NH03 318 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 IGSF8Q969P0 613 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 NT5C3BQ969T7 300 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 TOE1Q96GM8 510 aaKnown RBP20.81■□□□□ 0.92
ABCA3-206ENST00000569062 ERGIC2Q96RQ1 377 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 MTG2Q9H4K7 406 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 ANLNQ9NQW6 1124 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 WSB2Q9NYS7 404 aaPredicted RBP20.81■□□□□ 0.92
ABCA3-206ENST00000569062 KIAA1522Q9P206 1035 aaPredicted RBP20.81■□□□□ 0.92
ABCA3-206ENST00000569062 DAAM1Q9Y4D1 1078 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 HS3ST4Q9Y661 456 aa20.81■□□□□ 0.92
ABCA3-206ENST00000569062 NYNRINQ9P2P1 1898 aaKnown RBP20.81■□□□□ 0.92
ABCA3-206ENST00000569062 NDUFS2O75306 463 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 PAGE1O75459 146 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 ADCY5O95622 1261 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 CYP1A1P04798 512 aaPredicted RBP20.8■□□□□ 0.92
ABCA3-206ENST00000569062 CD6P30203 668 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 FLT3P36888 993 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 STAT1P42224 750 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 CTSOP43234 321 aaPredicted RBP20.8■□□□□ 0.92
ABCA3-206ENST00000569062 IRAK1P51617 712 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 CENPCQ03188 943 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 AUHQ13825 339 aaKnown RBP20.8■□□□□ 0.92
ABCA3-206ENST00000569062 TRIM61Q5EBN2 209 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 PEAR1Q5VY43 1037 aaPredicted RBP20.8■□□□□ 0.92
ABCA3-206ENST00000569062 TRNP1Q6NT89 227 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 DHX40Q8IX18 779 aaKnown RBP20.8■□□□□ 0.92
ABCA3-206ENST00000569062 MRGPRX3Q96LB0 322 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 HSPA12BQ96MM6 686 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 TBCBQ99426 244 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 NAT10Q9H0A0 1025 aaKnown RBP20.8■□□□□ 0.92
ABCA3-206ENST00000569062 PRSS16Q9NQE7 514 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 RRN3Q9NYV6 651 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 VANGL2Q9ULK5 521 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 STAP1Q9ULZ2 295 aa20.8■□□□□ 0.92
ABCA3-206ENST00000569062 I6L893 689 aaPredicted RBP20.79■□□□□ 0.92
ABCA3-206ENST00000569062 TM4SF5O14894 197 aa20.79■□□□□ 0.92
ABCA3-206ENST00000569062 ASLP04424 464 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms