RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 ZNF445P59923 1031 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 STAT4Q14765 748 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 KMT5BQ4FZB7 885 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 ADGRF1Q5T601 910 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 PPP1R26Q5T8A7 1209 aaPredicted RBP16.83■□□□□ 0.28
CLK3-223ENST00000568488 SLC25A45Q8N413 288 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 WFDC5Q8TCV5 224 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 TAF4BQ92750 862 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 TNMDQ9H2S6 317 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 ASCL3Q9NQ33 180 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 STIM2Q9P246 746 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 SFMBT1Q9UHJ3 866 aa16.83■□□□□ 0.28
CLK3-223ENST00000568488 NTRK1P04629 796 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 MYF5P13349 255 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 GOT1P17174 413 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 ADPRHP54922 357 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 PPP2CBP62714 309 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 PPP2CAP67775 309 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 DLG4P78352 724 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 C3orf38Q5JPI3 329 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 C9orf64Q5T6V5 341 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.82■□□□□ 0.28
CLK3-223ENST00000568488 AADATQ8N5Z0 425 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 RNF139Q8WU17 664 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 NDRG1Q92597 394 aaKnown RBP16.82■□□□□ 0.28
CLK3-223ENST00000568488 MYO19Q96H55 970 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 DNAI2Q9GZS0 605 aa16.82■□□□□ 0.28
CLK3-223ENST00000568488 TFIP11Q9UBB9 837 aaKnown RBP16.82■□□□□ 0.28
CLK3-223ENST00000568488 PTPN13Q12923 2485 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 UBE4BO95155 1302 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 A0A1B0GVM2 712 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 VPS37CA5D8V6 355 aaPredicted RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 TTC34A8MYJ7 566 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 ASS1P00966 412 aaKnown RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 SLFN14P0C7P3 912 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 CSKP41240 450 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 PIK3CAP42336 1068 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 CLDN10P78369 228 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 NFKB2Q00653 900 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 AMPD3Q01432 767 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 INCA1Q0VD86 236 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 ZSCAN23Q3MJ62 389 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 ZNF394Q53GI3 561 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 SGO2Q562F6 1265 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 RFWD3Q6PCD5 774 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 PIGZQ86VD9 579 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 MFN1Q8IWA4 741 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 EXD3Q8N9H8 876 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 OR4C6Q8NH72 309 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 CCDC97Q96F63 343 aaPredicted RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 OLA1Q9NTK5 396 aaKnown RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 UCKL1Q9NWZ5 548 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 CGNQ9P2M7 1197 aaKnown RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 TPX2Q9ULW0 747 aaKnown RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 SATB2Q9UPW6 733 aa16.81■□□□□ 0.28
CLK3-223ENST00000568488 HBS1LQ9Y450 684 aaKnown RBP16.81■□□□□ 0.28
CLK3-223ENST00000568488 GOLGA6L7A0A1B0GV03 622 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 TARSL2A2RTX5 802 aaKnown RBP16.8■□□□□ 0.28
CLK3-223ENST00000568488 IL1BP01584 269 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 ASLP04424 464 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 C5AR1P21730 350 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 DGKAP23743 735 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 TKTL1P51854 596 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 POM121L1PQ3SYA9 428 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 ZACNQ401N2 412 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 FAM173BQ6P4H8 233 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 FOXR1Q6PIV2 292 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 SV2AQ7L0J3 742 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 IQCHQ86VS3 1027 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 C12orf56Q8IXR9 622 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 STK40Q8N2I9 435 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 EDEM1Q92611 657 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 TTC17Q96AE7 1141 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 FAM129BQ96TA1 746 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 SLC39A2Q9NP94 309 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 ARHGAP20Q9P2F6 1191 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 STOML2Q9UJZ1 356 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 CA5BQ9Y2D0 317 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 SSUH2Q9Y2M2 353 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 CEP83Q9Y592 693 aa16.8■□□□□ 0.28
CLK3-223ENST00000568488 LATO43561 262 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 ZBED1O96006 694 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 ADH1BP00325 375 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 CKMT1AP12532 417 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 OVGP1Q12889 678 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 KNOP1Q1ED39 458 aaKnown RBP16.79■□□□□ 0.28
CLK3-223ENST00000568488 PIK3R6Q5UE93 754 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 ZNF574Q6ZN55 896 aaPredicted RBP16.79■□□□□ 0.28
CLK3-223ENST00000568488 ATG14Q6ZNE5 492 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 CARNMT1Q8N4J0 409 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 MAPK15Q8TD08 544 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 KLHDC7BQ96G42 594 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 MRGPRX3Q96LB0 322 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 ARHGAP9Q9BRR9 750 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 ULBP1Q9BZM6 244 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 IMPG2Q9BZV3 1241 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 CYP3A43Q9HB55 503 aa16.79■□□□□ 0.28
CLK3-223ENST00000568488 KBTBD4Q9NVX7 518 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms