RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ZFAND2BQ8WV99 257 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 KCTD13Q8WZ19 329 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 GFM2Q969S9 779 aaKnown RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 NTAN1Q96AB6 310 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 C18orf25Q96B23 403 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 ACSF2Q96CM8 615 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 CSPG4P5Q96PW8 444 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 BTBD9Q96Q07 612 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 FDXACB1Q9BRP7 624 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 IL22Q9GZX6 179 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 ILKAPQ9H0C8 392 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 ASCC2Q9H1I8 757 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 MRM3Q9HC36 420 aaKnown RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 ARL8BQ9NVJ2 186 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 C6orf203Q9P0P8 240 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 IPO11Q9UI26 975 aaKnown RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 AAR2Q9Y312 384 aaKnown RBP7.84□□□□□ -1.15
ATXN3-250ENST00000568290 SNX9Q9Y5X1 595 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 SLC4A7Q9Y6M7 1214 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 PARP14Q460N5 1801 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 LOC285556D6RIA3 1793 aa7.84□□□□□ -1.15
ATXN3-250ENST00000568290 NRCAMQ92823 1304 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 SMIM35A0A1B0GVV1 85 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CAPN14A8MX76 684 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ZBTB42B2RXF5 422 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 H0Y3Z8 333 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 NFKBIEO00221 500 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CCNT2O60583 730 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PLIN3O60664 434 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 TRIM13O60858 407 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 DGKIO75912 1065 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ANXA9O76027 345 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 USP1O94782 785 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 HSPA4LO95757 839 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CD48P09326 243 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 RALBP11234 206 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CPA3P15088 417 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CRABP2P29373 138 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 RAP1GAPP47736 663 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 LHX1P48742 406 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 HARS2P49590 506 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 SULT1E1P49888 294 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CLCN3P51790 818 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ABCE1P61221 599 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ROR2Q01974 943 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 SNAPC2Q13487 334 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 EFTUD2Q15029 972 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 HERC3Q15034 1050 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PAFAH1B3Q15102 231 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 TMEM259Q4ZIN3 620 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PKDCCQ504Y2 493 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 RARS2Q5T160 578 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 MROH9Q5TGP6 573 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 EEF1DP3Q658K8 133 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PDPK2PQ6A1A2 396 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 IQSEC1Q6DN90 963 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PACS1Q6VY07 963 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PRUNE1Q86TP1 453 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ULK2Q8IYT8 1036 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 UNC5BQ8IZJ1 945 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PQLC3Q8N755 202 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 LINC01465Q8N7H1 131 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CCNYQ8ND76 341 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ICA1LQ8NDH6 482 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 GPRC5AQ8NFJ5 357 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CXorf38Q8TB03 319 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CALML6Q8TD86 181 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ACTRT2Q8TDY3 377 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PDCD6IPQ8WUM4 868 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 ISL2Q96A47 359 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CERS2Q96G23 380 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 SNX27Q96L92 541 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 RTKNQ9BST9 563 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 THTPAQ9BU02 230 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 KATNAL1Q9BW62 490 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 UBE2OQ9C0C9 1292 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 KLHL4Q9C0H6 718 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 NMUR2Q9GZQ4 415 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 KCNK13Q9HB14 408 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 EML4Q9HC35 981 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 XPNPEP3Q9NQH7 507 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 PFDN4Q9NQP4 134 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 NMRK1Q9NWW6 199 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 DDX43Q9NXZ2 648 aaKnown RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 BTBD7Q9P203 1132 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 FNIP2Q9P278 1114 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 KLHL8Q9P2G9 620 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 SAE1Q9UBE0 346 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-250ENST00000568290 CYTH4Q9UIA0 394 aa7.83□□□□□ -1.16
ATXN3-250ENST00000568290 WDR81Q562E7 1941 aa7.82□□□□□ -1.16
ATXN3-250ENST00000568290 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
ATXN3-250ENST00000568290 FAM237BA0A1B0GVD1 139 aa7.82□□□□□ -1.16
ATXN3-250ENST00000568290 SMIM31A0A1B0GVY4 71 aa7.82□□□□□ -1.16
ATXN3-250ENST00000568290 TCRBV7S3A2A0A539 114 aa7.82□□□□□ -1.16
ATXN3-250ENST00000568290 A8MUI8 341 aa7.82□□□□□ -1.16
ATXN3-250ENST00000568290 C9IYK1 514 aa7.82□□□□□ -1.16
ATXN3-250ENST00000568290 H3BRB1 525 aa7.82□□□□□ -1.16
ATXN3-250ENST00000568290 EEF2KO00418 725 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms