RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 GAKO14976 1311 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 COL5A2P05997 1499 aaPredicted RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 CAMTA1Q9Y6Y1 1673 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 HEATR9A2RTY3 570 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CBFA2T3O75081 653 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 SRP72O76094 671 aaKnown RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 PENKP01210 267 aaPredicted RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 CRHR1P34998 444 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 GABRB2P47870 512 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 TRPC1P48995 793 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 SNX16P57768 344 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 PSME3P61289 254 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 SNRPFP62306 86 aaKnown RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 MRPS15P82914 257 aaKnown RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 DAB2P98082 770 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 XIAPP98170 497 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 BOLA3Q53S33 107 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 IL23RQ5VWK5 629 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 RWDD4Q6NW29 188 aaKnown RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 POTEHQ6S545 545 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 TFAP2BQ92481 460 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 COX4I2Q96KJ9 171 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CPXM1Q96SM3 734 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 GPATCH1Q9BRR8 931 aaKnown RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 MED10Q9BTT4 135 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 MRPL4Q9BYD3 311 aaKnown RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 BRD8Q9H0E9 1235 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CXorf21Q9HAI6 301 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CLK4Q9HAZ1 481 aaKnown RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 N4BP2Q86UW6 1770 aaPredicted RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 SNED1Q8TER0 1413 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 DYTNA2CJ06 578 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 PDLIM1O00151 329 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CHRNGP07510 517 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CYP2F1P24903 491 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 SPP2Q13103 211 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 INPP5AQ14642 412 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 HHIPL2Q6UWX4 724 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 GK5Q6ZS86 529 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 OR6P1Q8NGX9 317 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CNPY3Q9BT09 278 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 CCDC106Q9BWC9 280 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 TMEM39BQ9GZU3 492 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 STK39Q9UEW8 545 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 SNX9Q9Y5X1 595 aa11.15□□□□□ -0.62
PALB2-206ENST00000568219 ASTN2O75129 1339 aaPredicted RBP11.15□□□□□ -0.62
PALB2-206ENST00000568219 NR5A2O00482 541 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 PLIN3O60664 434 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 ALBP02768 609 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 PTGER2P43116 358 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 PTP4A2Q12974 167 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 NCCRP1Q6ZVX7 275 aaPredicted RBP11.15□□□□□ -0.63
PALB2-206ENST00000568219 ADCK1Q86TW2 530 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 DHFR2Q86XF0 187 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 HERC6Q8IVU3 1022 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 ADCY4Q8NFM4 1077 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 ACTRT2Q8TDY3 377 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 MFSD14AQ96MC6 490 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 MRPL40Q9NQ50 206 aaKnown RBP11.15□□□□□ -0.63
PALB2-206ENST00000568219 DNAJB4Q9UDY4 337 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 ATP8B3O60423 1300 aa11.15□□□□□ -0.63
PALB2-206ENST00000568219 A0A1W2PPW3 197 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 TOR1BO14657 336 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 CHADO15335 359 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 GRIN3BO60391 1043 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 SUPT7LO94864 414 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 VAPBO95292 243 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 TM4SF1P30408 202 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 PPARGP37231 505 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 GP5P40197 560 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 CCR10P46092 362 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 GRIA4P48058 902 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 GJA8P48165 433 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 GBE1Q04446 702 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 DGKZQ13574 1117 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 ADGRE1Q14246 886 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 FAM83EQ2M2I3 478 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 XKR3Q5GH77 459 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 SETD3Q86TU7 594 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 TFB1MQ8WVM0 346 aaKnown RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 CAPSLQ8WWF8 208 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 ELMO2Q96JJ3 720 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 PGLYRP2Q96PD5 576 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 CGRRF1Q99675 332 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 COPG2Q9UBF2 871 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 RAB26Q9ULW5 256 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 ZNF232Q9UNY5 417 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 AKT3Q9Y243 479 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 KCPQ6ZWJ8 1503 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 KCNU1A8MYU2 1149 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 BIRC5O15392 142 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 RPL14P50914 215 aaKnown RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 KPNA1P52294 538 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 YWHAHQ04917 246 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 MSLNQ13421 630 aaPredicted RBP11.14□□□□□ -0.63
PALB2-206ENST00000568219 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 UBAP1Q9NZ09 502 aa11.14□□□□□ -0.63
PALB2-206ENST00000568219 CIDEBQ9UHD4 219 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms