RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 C1orf131Q8NDD1 294 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 ZNF397Q8NF99 534 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 OR2T3Q8NH03 318 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 FIBINQ8TAL6 211 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ADAM32Q8TC27 787 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ENOX1Q8TC92 643 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 WFDC5Q8TCV5 224 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 GPT2Q8TD30 523 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SORCS1Q8WY21 1168 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PRCCQ92733 491 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 FOXJ1Q92949 421 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ERLEC1Q96DZ1 483 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SIPA1Q96FS4 1042 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ZNF419Q96HQ0 510 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 HSPA12BQ96MM6 686 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PRICKLE1Q96MT3 831 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 SLC2A13Q96QE2 648 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 CPXM1Q96SM3 734 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 LSM14BQ9BX40 385 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 MKRN2Q9H000 416 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 NUCKS1Q9H1E3 243 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 SLC6A17Q9H1V8 727 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 FBRSQ9HAH7 460 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TMEM9BQ9NQ34 198 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PLCB1Q9NQ66 1216 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ITM2CQ9NQX7 267 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SAMSN1Q9NSI8 373 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 TMEM74BQ9NUR3 256 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TMEM51Q9NW97 253 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.96□□□□□ -1.62
CLK3-219ENST00000567805 WSB2Q9NYS7 404 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 RRN3Q9NYV6 651 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 STIM2Q9P246 746 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 USP36Q9P275 1121 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 TJP2Q9UDY2 1190 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 SLC12A6Q9UHW9 1150 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 AJAP1Q9UKB5 411 aaPredicted RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 NFE2L3Q9Y4A8 694 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 PLXNA2O75051 1894 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 TMEM131Q92545 1883 aa4.96□□□□□ -1.62
CLK3-219ENST00000567805 ATXN2Q99700 1313 aaKnown RBP4.96□□□□□ -1.62
CLK3-219ENST00000567805 FRYQ5TBA9 3013 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 C4orf47A7E2U8 309 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 KCNU1A8MYU2 1149 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 F5H5T6 163 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 F8VZ95 297 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 H0Y626 953 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CDX4O14627 284 aaPredicted RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 DAB1O75553 588 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 LUC7L3O95232 432 aaKnown RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 MOCS3O95396 460 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 LSM8O95777 96 aaKnown RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 ASLP04424 464 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ERBB2P04626 1255 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CFIP05156 583 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SERPINF2P08697 491 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 PNMA6AP0CW24 399 aaPredicted RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 HLA-EP13747 358 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 UCHL3P15374 230 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CYP11B1P15538 503 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 GNSP15586 552 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ENGP17813 658 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ABCB4P21439 1286 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 TACR2P21452 398 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CD70P32970 193 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CDH5P33151 784 aaPredicted RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 NOS2P35228 1153 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SCNN1AP37088 669 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CSKP41240 450 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 MATKP42679 507 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ST8SIA6P61647 398 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 RPS24P62847 133 aaKnown RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 PITX1P78337 314 aaPredicted RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 CDK17Q00537 523 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SLC6A3Q01959 620 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ZBTB16Q05516 673 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 GFPT1Q06210 699 aaPredicted RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 SLC12A1Q13621 1099 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ARID5BQ14865 1188 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 DRAP1Q14919 205 aaPredicted RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 TAF5Q15542 800 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 PTPRNQ16849 979 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 PTPN20Q4JDL3 420 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ZC3H12AQ5D1E8 599 aaKnown RBP4.95□□□□□ -1.62
CLK3-219ENST00000567805 WDR45BQ5MNZ6 344 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 RABGAP1LQ5R372 815 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CDKAL1Q5VV42 579 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 RAP1GAP2Q684P5 730 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 OR6B2Q6IFH4 312 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SASS6Q6UVJ0 657 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 OLFML1Q6UWY5 402 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SLC26A9Q7LBE3 791 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CHSY1Q86X52 802 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 ZNF677Q86XU0 584 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 SLC41A1Q8IVJ1 513 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 RGL4Q8IZJ4 473 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 LGI2Q8N0V4 545 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 DEFB106AQ8N104 65 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CFAP52Q8N1V2 620 aa4.95□□□□□ -1.62
CLK3-219ENST00000567805 CARNMT1Q8N4J0 409 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms