RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 SP8Q8IXZ3 490 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 TERB1Q8NA31 727 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 ZNF420Q8TAQ5 688 aaPredicted RBP25.64■■□□□ 1.69
FANCA-221ENST00000566889 STON2Q8WXE9 905 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 TFAP2BQ92481 460 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 THAP11Q96EK4 314 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 PDLIM7Q9NR12 457 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 TMEM216Q9P0N5 145 aa25.64■■□□□ 1.69
FANCA-221ENST00000566889 H2AFYO75367 372 aaKnown RBP25.63■■□□□ 1.69
FANCA-221ENST00000566889 TADA2AO75478 443 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 ATG7O95352 703 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 CCNE2O96020 404 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 COL6A2P12110 1019 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 C21orf59P57076 290 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 ANKDD1AQ495B1 522 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 MPP5Q8N3R9 675 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 EMC1Q8N766 993 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 RCN3Q96D15 328 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 OR52B2Q96RD2 323 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 NIF3L1Q9GZT8 377 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 RNPEPQ9H4A4 650 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 EFCAB1Q9HAE3 211 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 MRPL40Q9NQ50 206 aaKnown RBP25.63■■□□□ 1.69
FANCA-221ENST00000566889 EBF1Q9UH73 591 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 PSMD12O00232 456 aaPredicted RBP25.63■■□□□ 1.69
FANCA-221ENST00000566889 CFLARO15519 480 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 PIGRP01833 764 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 MCF2P10911 925 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 EIF2AK2P19525 551 aaKnown RBP25.63■■□□□ 1.69
FANCA-221ENST00000566889 ART3Q13508 389 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 ZNF394Q53GI3 561 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 DENND1BQ6P3S1 775 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 FIBCD1Q8N539 461 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 PLD5Q8N7P1 536 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 KCNN1Q92952 543 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 TOP1MTQ969P6 601 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 PLEKHA8Q96JA3 519 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 VPS33BQ9H267 617 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.63■■□□□ 1.69
FANCA-221ENST00000566889 IPO11Q9UI26 975 aaKnown RBP25.63■■□□□ 1.69
FANCA-221ENST00000566889 AP4S1Q9Y587 144 aa25.63■■□□□ 1.69
FANCA-221ENST00000566889 PTPN1P18031 435 aaKnown RBP25.62■■□□□ 1.69
FANCA-221ENST00000566889 TTKP33981 857 aa25.62■■□□□ 1.69
FANCA-221ENST00000566889 TRAPPC3LQ5T215 181 aa25.62■■□□□ 1.69
FANCA-221ENST00000566889 TMEM53Q6P2H8 277 aa25.62■■□□□ 1.69
FANCA-221ENST00000566889 XYLT1Q86Y38 959 aa25.62■■□□□ 1.69
FANCA-221ENST00000566889 TDRD5Q8NAT2 981 aaKnown RBP25.62■■□□□ 1.69
FANCA-221ENST00000566889 MAPK15Q8TD08 544 aa25.62■■□□□ 1.69
FANCA-221ENST00000566889 CCDC68Q9H2F9 335 aa25.62■■□□□ 1.69
FANCA-221ENST00000566889 TRIM38O00635 465 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 ENO3P13929 434 aaPredicted RBP25.61■■□□□ 1.69
FANCA-221ENST00000566889 SLC10A2Q12908 348 aaPredicted RBP25.61■■□□□ 1.69
FANCA-221ENST00000566889 PPM1LQ5SGD2 360 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 IL23RQ5VWK5 629 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 NIPAL1Q6NVV3 410 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 RSBN1LQ6PCB5 846 aaPredicted RBP25.61■■□□□ 1.69
FANCA-221ENST00000566889 PRDM16Q9HAZ2 1276 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 MED7O43513 233 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 ESRRBO95718 433 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 MSX2P35548 267 aaPredicted RBP25.61■■□□□ 1.69
FANCA-221ENST00000566889 DCLRE1AQ6PJP8 1040 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 MCF2L2Q86YR7 1114 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 CHPT1Q8WUD6 406 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 USP13Q92995 863 aaPredicted RBP25.61■■□□□ 1.69
FANCA-221ENST00000566889 ASB9Q96DX5 294 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 MSTO1Q9BUK6 570 aa25.61■■□□□ 1.69
FANCA-221ENST00000566889 CCDC162PA2VCL2 907 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 KPNA7A9QM74 516 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 GRIN3AQ8TCU5 1115 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 HAPLN2Q9GZV7 340 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 POLR3FQ9H1D9 316 aaPredicted RBP25.6■■□□□ 1.69
FANCA-221ENST00000566889 GNPTGQ9UJJ9 305 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 APOL1O14791 398 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 TFPTP0C1Z6 253 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 GARSP41250 739 aaKnown RBP25.6■■□□□ 1.69
FANCA-221ENST00000566889 PDK2Q15119 407 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 MAMDC4Q6UXC1 1216 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 CENPSQ8N2Z9 138 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 CNTD1Q8N815 330 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 PEBP4Q96S96 227 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 DOK1Q99704 481 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 NEURL2Q9BR09 285 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 SPATA7Q9P0W8 599 aa25.6■■□□□ 1.69
FANCA-221ENST00000566889 GCATO75600 419 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 TYK2P29597 1187 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 BCAR1P56945 870 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 GHRHRQ02643 423 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 KCNC4Q03721 635 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 FASTKD5Q7L8L6 764 aaKnown RBP25.59■■□□□ 1.69
FANCA-221ENST00000566889 CDKL3Q8IVW4 592 aaPredicted RBP25.59■■□□□ 1.69
FANCA-221ENST00000566889 TNIP2Q8NFZ5 429 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 ACER1Q8TDN7 264 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 GPATCH1Q9BRR8 931 aaKnown RBP25.59■■□□□ 1.69
FANCA-221ENST00000566889 DCUN1D5Q9BTE7 237 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 MAF1Q9H063 256 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 ILKAPQ9H0C8 392 aaPredicted RBP25.59■■□□□ 1.69
FANCA-221ENST00000566889 ZNF385DQ9H6B1 395 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 SUCOQ9UBS9 1254 aaKnown RBP25.59■■□□□ 1.69
FANCA-221ENST00000566889 TJP2Q9UDY2 1190 aa25.59■■□□□ 1.69
FANCA-221ENST00000566889 FEM1BQ9UK73 627 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms