RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 VANGL2Q9ULK5 521 aa13.17□□□□□ -0.3
CFDP1-205ENST00000565646 MYO18AQ92614 2054 aaKnown RBP13.16□□□□□ -0.3
CFDP1-205ENST00000565646 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 E9PAM4 449 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 DDX3YO15523 660 aaKnown RBP13.16□□□□□ -0.3
CFDP1-205ENST00000565646 TSPAN3O60637 253 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 LRIG2O94898 1065 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 CYP17A1P05093 508 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 KRT7P08729 469 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 CD48P09326 243 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 IL4RP24394 825 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 CHKAP35790 457 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 RPS24P62847 133 aaKnown RBP13.16□□□□□ -0.3
CFDP1-205ENST00000565646 PDGFRLQ15198 375 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 DHCR24Q15392 516 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 LY6G5CQ5SRR4 150 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 MEI1Q5TIA1 1274 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 RNF43Q68DV7 783 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 ASCL5Q7RTU5 278 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 ANKS1BQ7Z6G8 1248 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 SLC35F6Q8N357 371 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 TSC1Q92574 1164 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 IRF7Q92985 503 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 CHFRQ96EP1 664 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 HES6Q96HZ4 224 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 TLR10Q9BXR5 811 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 PCDH18Q9HCL0 1135 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
CFDP1-205ENST00000565646 PCDHA3Q9Y5H8 950 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
CFDP1-205ENST00000565646 DRGXA6NNA5 263 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 F5H5T6 163 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 FANCGO15287 622 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
CFDP1-205ENST00000565646 PENKP01210 267 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-205ENST00000565646 HOXC13P31276 330 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 RUNX3Q13761 415 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 TAZQ16635 292 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 ACBD5Q5T8D3 534 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-205ENST00000565646 TPGS1Q6ZTW0 290 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 CIR1Q86X95 450 aaPredicted RBP13.15□□□□□ -0.3
CFDP1-205ENST00000565646 YAF2Q8IY57 180 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 KATNAL2Q8IYT4 538 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 CFAP52Q8N1V2 620 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 ATP2A3Q93084 1043 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 WDR24Q96S15 920 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
CFDP1-205ENST00000565646 BRD9Q9H8M2 597 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 GTSE1Q9NYZ3 720 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 CWC15Q9P013 229 aaKnown RBP13.15□□□□□ -0.3
CFDP1-205ENST00000565646 MARK1Q9P0L2 795 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 RIF1Q5UIP0 2472 aaKnown RBP13.15□□□□□ -0.3
CFDP1-205ENST00000565646 SPTBN4Q9H254 2564 aa13.15□□□□□ -0.3
CFDP1-205ENST00000565646 ATG2BQ96BY7 2078 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 CCDC66A2RUB6 948 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 MIF4GDA9UHW6 222 aaKnown RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 HOXC11O43248 304 aaPredicted RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 CREB3O43889 395 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 KIF5CO60282 957 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 SRGAP2O75044 1071 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 CNTN5O94779 1100 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 NFATC1O95644 943 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 GOT1P17174 413 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 KDELR1P24390 212 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 CDH6P55285 790 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 FOXK2Q01167 660 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 TDGQ13569 410 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 DPYSQ14117 519 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 DPYSL3Q14195 570 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 ALFQ53S48 1182 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 PPP6R3Q5H9R7 873 aaPredicted RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 DCAF12L1Q5VU92 463 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 MFSD7Q6UXD7 560 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 NLRP14Q86W24 1093 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 BHMTQ93088 406 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 TMA16Q96EY4 203 aaKnown RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 RPRD1AQ96P16 312 aaPredicted RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 CSPG4P5Q96PW8 444 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 EPAS1Q99814 870 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 MFSD1Q9H3U5 465 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 TRPV5Q9NQA5 729 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 PLK2Q9NYY3 685 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 MPP6Q9NZW5 540 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 PPARGC1AQ9UBK2 798 aaKnown RBP13.14□□□□□ -0.31
CFDP1-205ENST00000565646 CLEC4EQ9ULY5 219 aa13.14□□□□□ -0.31
CFDP1-205ENST00000565646 SHROOM3Q8TF72 1996 aa13.13□□□□□ -0.31
CFDP1-205ENST00000565646 NYNRINQ9P2P1 1898 aaKnown RBP13.13□□□□□ -0.31
CFDP1-205ENST00000565646 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
CFDP1-205ENST00000565646 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms