RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PENKP01210 267 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 HOXC6P09630 235 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FAM58BPP0C7Q3 252 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PIK3R1P27986 724 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ETFBP38117 255 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DPP6P42658 865 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CEACAM7Q14002 265 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CYLC2Q14093 348 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MIPOL1Q8TD10 442 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FAM210AQ96ND0 272 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CCT7Q99832 543 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CCDC28BQ9BUN5 200 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FRMD8P1Q9BZ68 369 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TRIP11Q15643 1979 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MED7O43513 233 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DESP17661 470 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FUT4P22083 530 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CDH5P33151 784 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 GPD2P43304 727 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 KCTD21Q4G0X4 260 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CYP2R1Q6VVX0 501 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TP53INP2Q8IXH6 220 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CLEC4CQ8WTT0 213 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 GAB3Q8WWW8 586 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 KLHL32Q96NJ5 620 aa21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PDGFDQ9GZP0 370 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 VWA5AO00534 786 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 AVPR1AP37288 418 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FAM47CQ5HY64 1035 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SH3D19Q5HYK7 790 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SLC9A4Q6AI14 798 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LAYNQ6UX15 382 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 NSUN6Q8TEA1 469 aaKnown RBP21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ANKRD36BP1Q96IX9 119 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 Q9H521 79 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DHX33Q9H6R0 707 aaKnown RBP21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 C20orf96Q9NUD7 363 aaPredicted RBP21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SYBUQ9NX95 663 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FAF1Q9UNN5 650 aaPredicted RBP21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 C2CD4BA6NLJ0 364 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ATP9BO43861 1147 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SEC24DO94855 1032 aaPredicted RBP21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PRKCBP05771 671 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SOX11P35716 441 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ARL2P36404 184 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 HEATR6Q6AI08 1181 aaKnown RBP21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ITPRIPL1Q6GPH6 555 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MARVELD2Q8N4S9 558 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 C7orf31Q8N865 590 aa21■□□□□ 0.95
MAP1LC3B-206ENST00000564844 WDR46O15213 610 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 HDCP19113 662 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CYP3A5P20815 502 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 IGBP1P78318 339 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 STYK1Q6J9G0 422 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DCLK2Q8N568 766 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 FNIP1Q8TF40 1166 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 BTBD9Q96Q07 612 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SLC4A5Q9BY07 1137 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SIX4Q9UIU6 781 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TSPAN16Q9UKR8 245 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SORCS3Q9UPU3 1222 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PAPSS1O43252 624 aaPredicted RBP20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MSCO60682 206 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 RNASEH2AO75792 299 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TNFAIP8O95379 198 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SERPINB9P50453 376 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PSMD7P51665 324 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 AMHR2Q16671 573 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TMEM259Q4ZIN3 620 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 GPRASP2Q96D09 838 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SNX15Q9NRS6 342 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DOLKQ9UPQ8 538 aa20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MRPL42Q9Y6G3 142 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TMEM233B4DJY2 109 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 OGTO15294 1046 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MT-CO1P00395 513 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 LSM12Q3MHD2 195 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 SH2D4BQ5SQS7 431 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 IL23RQ5VWK5 629 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 KLHL35Q6PF15 583 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 BNC2Q6ZN30 1099 aaPredicted RBP20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 KYQ8NBH2 561 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 NDRG1Q92597 394 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 CDKL2Q92772 493 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 TMEM176AQ96HP8 235 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 WRNIP1Q96S55 665 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MRPL4Q9BYD3 311 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 DEFB129Q9H1M3 183 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MOCS1Q9NZB8 636 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 GINS2Q9Y248 185 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 HCRTO43612 131 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PLA2G6O60733 806 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 MAPK10P53779 464 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ART3Q13508 389 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 ADGRE1Q14246 886 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 PMF1Q6P1K2 205 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 KLC3Q6P597 504 aa20.98■□□□□ 0.95
MAP1LC3B-206ENST00000564844 RSBN1LQ6PCB5 846 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms