RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 MRGPRX3Q96LB0 322 aa24.75■■□□□ 1.55
NME3-206ENST00000564252 RSPH9Q9H1X1 276 aaPredicted RBP24.75■■□□□ 1.55
NME3-206ENST00000564252 XPO7Q9UIA9 1087 aaKnown RBP24.75■■□□□ 1.55
NME3-206ENST00000564252 PCOLCE2Q9UKZ9 415 aa24.75■■□□□ 1.55
NME3-206ENST00000564252 FNDC3AQ9Y2H6 1198 aaKnown RBP24.75■■□□□ 1.55
NME3-206ENST00000564252 A0A1B0GVT2 93 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 LETM1O95202 739 aaPredicted RBP24.74■■□□□ 1.55
NME3-206ENST00000564252 MOCS2O96007 188 aaPredicted RBP24.74■■□□□ 1.55
NME3-206ENST00000564252 ASLP04424 464 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 CSNK1EP49674 416 aaKnown RBP24.74■■□□□ 1.55
NME3-206ENST00000564252 AFF3P51826 1226 aaKnown RBP24.74■■□□□ 1.55
NME3-206ENST00000564252 TTC31Q49AM3 519 aaPredicted RBP24.74■■□□□ 1.55
NME3-206ENST00000564252 DCAF6Q58WW2 860 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 FSCBQ5H9T9 825 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 CFAP52Q8N1V2 620 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 ZNF606Q8WXB4 792 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 SGK2Q9HBY8 427 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 OSGEPQ9NPF4 335 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 ACP6Q9NPH0 428 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 TM7SF3Q9NS93 570 aa24.74■■□□□ 1.55
NME3-206ENST00000564252 E5RJQ4 531 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 MED7O43513 233 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 FTH1P19P0C7X4 201 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 GNA15P30679 374 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 ST8SIA6P61647 398 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 CDH18Q13634 790 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 HNRNPA1L2Q32P51 320 aaKnown RBP24.73■■□□□ 1.55
NME3-206ENST00000564252 MMS22LQ6ZRQ5 1243 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 ENOSF1Q7L5Y1 443 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 TMEM110Q86TL2 294 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 ADAMTS14Q8WXS8 1223 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 ZCCHC14Q8WYQ9 949 aaKnown RBP24.73■■□□□ 1.55
NME3-206ENST00000564252 BIRC7Q96CA5 298 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 TRIM62Q9BVG3 475 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 POPDC2Q9HBU9 364 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 TM9SF3Q9HD45 589 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 PKD1L2Q7Z442 2459 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 KNL1Q8NG31 2342 aa24.73■■□□□ 1.55
NME3-206ENST00000564252 FAM208BQ5VWN6 2430 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 CAPN9O14815 690 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 THAP12O43422 761 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 SIN3BO75182 1162 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 LUC7L3O95232 432 aaKnown RBP24.72■■□□□ 1.55
NME3-206ENST00000564252 IGLV3-25P01717 112 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 ARID5BQ14865 1188 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 PITRM1Q5JRX3 1037 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 GJB7Q6PEY0 223 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 DBX2Q6ZNG2 339 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 GLRX5Q86SX6 157 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 KDM1BQ8NB78 822 aa24.72■■□□□ 1.55
NME3-206ENST00000564252 PABPC3Q9H361 631 aaKnown RBP24.72■■□□□ 1.55
NME3-206ENST00000564252 DSPP15924 2871 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 FSBPO95073 299 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 FGFR1OPO95684 399 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 TRUB2O95900 331 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 APOEP02649 317 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 CTSOP43234 321 aaPredicted RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 YWHAZP63104 245 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 PITX1P78337 314 aaPredicted RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 EIF4EBP2Q13542 120 aaPredicted RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 KIF19Q2TAC6 998 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 ZC3H12AQ5D1E8 599 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 RAP1GAP2Q684P5 730 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 TRIM65Q6PJ69 517 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 USP30Q70CQ3 517 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 CCDC117Q8IWD4 279 aaPredicted RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 DHX40Q8IX18 779 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 LGI2Q8N0V4 545 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 PNPLA1Q8N8W4 532 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 BAHD1Q8TBE0 780 aaPredicted RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 SETD7Q8WTS6 366 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 ORAI3Q9BRQ5 295 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 CRACR2AQ9BSW2 395 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 THAP9Q9H5L6 903 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 TJP2Q9UDY2 1190 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 RALYQ9UKM9 306 aaKnown RBP24.71■■□□□ 1.55
NME3-206ENST00000564252 SCML1Q9UN30 329 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 ERVW-1Q9UQF0 538 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 PCDHGB2Q9Y5G2 931 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 SNX11Q9Y5W9 270 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 LAMA5O15230 3695 aa24.71■■□□□ 1.55
NME3-206ENST00000564252 SRRM3A6NNA2 597 aaPredicted RBP24.7■■□□□ 1.54
NME3-206ENST00000564252 BECN2A8MW95 431 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 SRPRAP08240 638 aaKnown RBP24.7■■□□□ 1.54
NME3-206ENST00000564252 TACR2P21452 398 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 CD27P26842 260 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 GRIA4P48058 902 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 PDCLQ13371 301 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 C9orf64Q5T6V5 341 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 SLCO6A1Q86UG4 719 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 CHSY1Q86X52 802 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 BTN2A3PQ96KV6 586 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 MED15Q96RN5 788 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 SERGEFQ9UGK8 458 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 RWDD2AQ9UIY3 292 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 TMEM131Q92545 1883 aa24.7■■□□□ 1.54
NME3-206ENST00000564252 ITIH6Q6UXX5 1313 aa24.69■■□□□ 1.54
NME3-206ENST00000564252 NYNRINQ9P2P1 1898 aaKnown RBP24.69■■□□□ 1.54
NME3-206ENST00000564252 IGHV4-34P06331 123 aa24.69■■□□□ 1.54
NME3-206ENST00000564252 SLC9A1P19634 815 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms