RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 VPS52Q8N1B4 723 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 TAB3Q8N5C8 712 aaPredicted RBP11.97□□□□□ -0.49
PCAT1-202ENST00000561978 COLGALT1Q8NBJ5 622 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 DENND1AQ8TEH3 1009 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 CCT6BQ92526 530 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 KCTD15Q96SI1 283 aaPredicted RBP11.97□□□□□ -0.49
PCAT1-202ENST00000561978 PAFAH2Q99487 392 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 POPDC2Q9HBU9 364 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 MTMR10Q9NXD2 777 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 RRN3Q9NYV6 651 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 CDH9Q9ULB4 789 aa11.97□□□□□ -0.49
PCAT1-202ENST00000561978 PRG3Q9Y2Y8 225 aaPredicted RBP11.97□□□□□ -0.49
PCAT1-202ENST00000561978 INPPL1O15357 1258 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 ATP2C2O75185 946 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 BANF1O75531 89 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 STK10O94804 968 aaKnown RBP11.96□□□□□ -0.49
PCAT1-202ENST00000561978 ASMTLO95671 621 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 TFE3P19532 575 aaPredicted RBP11.96□□□□□ -0.49
PCAT1-202ENST00000561978 TPSB2P20231 275 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 PCSK1P29120 753 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 OR1G1P47890 313 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 SLC11A1P49279 550 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 ADCY1Q08828 1119 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 FOXD4Q12950 439 aaPredicted RBP11.96□□□□□ -0.49
PCAT1-202ENST00000561978 GRIK3Q13003 919 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 TPSAB1Q15661 275 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 SEPT7Q16181 437 aaKnown RBP11.96□□□□□ -0.49
PCAT1-202ENST00000561978 MDH1BQ5I0G3 518 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 HEATR6Q6AI08 1181 aaKnown RBP11.96□□□□□ -0.49
PCAT1-202ENST00000561978 RGS9BPQ6ZS82 235 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 CLEC20AQ6ZU45 233 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 PAQR9Q6ZVX9 377 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 COLGALT2Q8IYK4 626 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 GDAP1Q8TB36 358 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 TFB1MQ8WVM0 346 aaKnown RBP11.96□□□□□ -0.49
PCAT1-202ENST00000561978 GUCD1Q96NT3 240 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 QKIQ96PU8 341 aaKnown RBP eCLIP11.96□□□□□ -0.49
PCAT1-202ENST00000561978 SLC2A13Q96QE2 648 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 NPY6RQ99463 290 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 CHMP2BQ9UQN3 213 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 PCDHB12Q9Y5F1 795 aa11.96□□□□□ -0.49
PCAT1-202ENST00000561978 SF3B1O75533 1304 aaKnown RBP eCLIP11.96□□□□□ -0.5
PCAT1-202ENST00000561978 FOXO6A8MYZ6 492 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 CAPN9O14815 690 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 ITGB1P05556 798 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 GALTP07902 379 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 LAG3P18627 525 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 CA4P22748 312 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 FDFT1P37268 417 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 TKTL1P51854 596 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 YWHAGP61981 247 aaKnown RBP eCLIP11.96□□□□□ -0.5
PCAT1-202ENST00000561978 CDK16Q00536 496 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 DSC1Q08554 894 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 LGSNQ5TDP6 509 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 PDZD4Q76G19 769 aaPredicted RBP11.96□□□□□ -0.5
PCAT1-202ENST00000561978 BNIPLQ7Z465 357 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 CCDC185Q8N715 623 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 GBP7Q8N8V2 638 aaPredicted RBP11.96□□□□□ -0.5
PCAT1-202ENST00000561978 ZNF558Q96NG5 402 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 CDX2Q99626 313 aaPredicted RBP11.96□□□□□ -0.5
PCAT1-202ENST00000561978 SYT15Q9BQS2 421 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 ETNK1Q9HBU6 452 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 FGFR1OP2Q9NVK5 253 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 RWDD3Q9Y3V2 267 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 CAPN7Q9Y6W3 813 aa11.96□□□□□ -0.5
PCAT1-202ENST00000561978 COL4A4P53420 1690 aaPredicted RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 ARHGEF37A1IGU5 675 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 KLHL33A6NCF5 533 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 C5orf67F2Z3F1 127 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 H3BNC9 293 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 M0QYT0 321 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 CLDN5O00501 218 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 NRP1O14786 923 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 GRM6O15303 877 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 TM9SF1O15321 606 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 TYROBPO43914 113 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 LPXNO60711 386 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 SPAG7O75391 227 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 FGF18O76093 207 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 OAS1P00973 400 aaKnown RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 ALDH2P05091 517 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 APRTP07741 180 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 GSTA1P08263 222 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 INHBAP08476 426 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 KRT4P19013 534 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 IGFBP6P24592 240 aaPredicted RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 ACAT1P24752 427 aaKnown RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 CLCNKBP51801 687 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 ZNF135P52742 658 aaPredicted RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 ATXN1P54253 815 aaKnown RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 MAP3K7CLP57077 242 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 GBE1Q04446 702 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 DEUP1Q05D60 604 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 GPM6BQ13491 265 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 ADGRE1Q14246 886 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 TTC31Q49AM3 519 aaPredicted RBP11.95□□□□□ -0.5
PCAT1-202ENST00000561978 HHATQ5VTY9 493 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 TRPM8Q7Z2W7 1104 aa11.95□□□□□ -0.5
PCAT1-202ENST00000561978 SPATA21Q7Z572 469 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms