RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 EFCAB12Q6NXP0 572 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 LRRC8BQ6P9F7 803 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 ACOT1Q86TX2 421 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 EXOC8Q8IYI6 725 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 DGCR14Q96DF8 476 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 LENG8Q96PV6 779 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 CSPG4P5Q96PW8 444 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 CDH19Q9H159 772 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 SNX15Q9NRS6 342 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 SYBUQ9NX95 663 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 HESX1Q9UBX0 185 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 PCDHB12Q9Y5F1 795 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 PARP14Q460N5 1801 aa14.33□□□□□ -0.12
VPS9D1-202ENST00000561976 ZBTB42B2RXF5 422 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 C19orf81C9J6K1 198 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 PAPSS1O43252 624 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 IQCF3P0C7M6 154 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 ACAT1P24752 427 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 PRDX6P30041 224 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 GP5P40197 560 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 RPL26P61254 145 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 DPYSL2Q16555 572 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 HSDL1Q3SXM5 330 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 CCDC153Q494R4 210 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 RARS2Q5T160 578 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 EPGNQ6UW88 154 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 RBM44Q6ZP01 1051 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 SAMD7Q7Z3H4 446 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 CHST13Q8NET6 341 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 KHSRPQ92945 711 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 KCTD15Q96SI1 283 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 SERPINI1Q99574 410 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 C6orf203Q9P0P8 240 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 HACL1Q9UJ83 578 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 RPS6KL1Q9Y6S9 549 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 MYO18AQ92614 2054 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 MGAMO43451 1857 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 NEMP1O14524 444 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 TOMM70O94826 608 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 POLBP06746 335 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 INCA1Q0VD86 236 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 NAB1Q13506 487 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 TTC30AQ86WT1 665 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 DCLK2Q8N568 766 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 CXorf38Q8TB03 319 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 SREK1Q8WXA9 508 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 ARNTL2Q8WYA1 636 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 CPB2Q96IY4 423 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 C12orf42Q96LP6 360 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 CNBD2Q96M20 576 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 VRTNQ9H8Y1 702 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 TCF7L2Q9NQB0 619 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 GGA3Q9NZ52 723 aa14.32□□□□□ -0.12
VPS9D1-202ENST00000561976 IGKV6-21A0A0C4DH24 114 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 CFLARO15519 480 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 ATP6V1B1P15313 513 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 GOT1P17174 413 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 RGS2P41220 211 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 RPL5P46777 297 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 MRPS22P82650 360 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 RBP5P82980 135 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 SNAPC2Q13487 334 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 NCBP2-AS2Q69YL0 99 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 PLD6Q8N2A8 252 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 TDRD5Q8NAT2 981 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 MAPK15Q8TD08 544 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 OR52B2Q96RD2 323 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 STK39Q9UEW8 545 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 LZTS1Q9Y250 596 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 RNF103O00237 685 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 F7P08709 466 aaPredicted RBP14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 SMIM18P0DKX4 95 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 THRAP10827 490 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 MSX2P35548 267 aaPredicted RBP14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 ARL4AP40617 200 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 IGBP1P78318 339 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 FLOT2Q14254 428 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 SLC10A6Q3KNW5 377 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 NAPRTQ6XQN6 538 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 SNX32Q86XE0 403 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 PYROXD2Q8N2H3 581 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 MARVELD2Q8N4S9 558 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 CCNYQ8ND76 341 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 CLEC4CQ8WTT0 213 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 CERS2Q96G23 380 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 PGLYRP2Q96PD5 576 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 ASB7Q9H672 318 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 APPL1Q9UKG1 709 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 ANK1P16157 1881 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 RLFQ13129 1914 aa14.31□□□□□ -0.12
VPS9D1-202ENST00000561976 ZNF487B1APH4 448 aa14.3□□□□□ -0.12
VPS9D1-202ENST00000561976 AP1G1O43747 822 aa14.3□□□□□ -0.12
VPS9D1-202ENST00000561976 DGKIO75912 1065 aa14.3□□□□□ -0.12
VPS9D1-202ENST00000561976 PYGLP06737 847 aa14.3□□□□□ -0.12
VPS9D1-202ENST00000561976 PSMB4P28070 264 aa14.3□□□□□ -0.12
VPS9D1-202ENST00000561976 ATXN3P54252 364 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-202ENST00000561976 TNFAIP2Q03169 654 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms