RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 RAP1GAP2Q684P5 730 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 DUPD1Q68J44 220 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 HEATR6Q6AI08 1181 aaKnown RBP10.61□□□□□ -0.71
USP3-219ENST00000561326 PCGF5Q86SE9 256 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 CHSY1Q86X52 802 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 DENND1CQ8IV53 801 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 CCNYQ8ND76 341 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 TFB1MQ8WVM0 346 aaKnown RBP10.61□□□□□ -0.71
USP3-219ENST00000561326 SEC14L1Q92503 715 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 ANKRD7Q92527 254 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 SMG7Q92540 1137 aaKnown RBP10.61□□□□□ -0.71
USP3-219ENST00000561326 SNF8Q96H20 258 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 CYP2S1Q96SQ9 504 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 HINFPQ9BQA5 517 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 TRIM51Q9BSJ1 452 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 TRIM31Q9BZY9 425 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 ZYG11BQ9C0D3 744 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 TSPYL1Q9H0U9 437 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 TASP1Q9H6P5 420 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 PCDH9Q9HC56 1237 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 ETNK2Q9NVF9 386 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 DTLQ9NZJ0 730 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 WHRNQ9P202 907 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 VANGL2Q9ULK5 521 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 SH3BP1Q9Y3L3 701 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 SNX10Q9Y5X0 201 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 C2orf16Q68DN1 1984 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 CHD5Q8TDI0 1954 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 MYOFQ9NZM1 2061 aa10.61□□□□□ -0.71
USP3-219ENST00000561326 IGLV3-10A0A075B6K4 115 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 DRGXA6NNA5 263 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 WASH4PA8MWX3 477 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 KCNN4O15554 427 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 OLFM2O95897 454 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 IRF1P10914 325 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 H2AFXP16104 143 aaPredicted RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 TACR2P21452 398 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 CORO1AP31146 461 aaKnown RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 CARSP49589 748 aaKnown RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 NDST2P52849 883 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 CYP4F8P98187 520 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 GBE1Q04446 702 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 ZNF33AQ06730 810 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 SLC10A2Q12908 348 aaPredicted RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 GPR158Q5T848 1215 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 ZNF697Q5TEC3 545 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 MANEALQ5VSG8 457 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 GRASPQ7Z6J2 395 aaPredicted RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 ADGRD2Q7Z7M1 963 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 LGI2Q8N0V4 545 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 RTL3Q8N8U3 475 aaKnown RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 FAM71DQ8N9W8 422 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 CASKIN2Q8WXE0 1202 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 RPRD1AQ96P16 312 aaPredicted RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 DPH5Q9H2P9 285 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 NSUN3Q9H649 340 aaKnown RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 SFXN1Q9H9B4 322 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 SMPD4Q9NXE4 827 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 LMCD1Q9NZU5 365 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 DNMT3BQ9UBC3 853 aaKnown RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 MTRF1LQ9UGC7 380 aaKnown RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 XPO7Q9UIA9 1087 aaKnown RBP10.6□□□□□ -0.71
USP3-219ENST00000561326 ANAPC5Q9UJX4 755 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 SNX24Q9Y343 169 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 CPQQ9Y646 472 aa10.6□□□□□ -0.71
USP3-219ENST00000561326 TNRC18O15417 2968 aaPredicted RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 A0A1W2PPC1 479 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 TYW5A2RUC4 315 aaKnown RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 BHMG1C9JSJ3 638 aaPredicted RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 SMAPO00193 183 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 MFSD11O43934 449 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 CHKAP35790 457 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 AP1B1Q10567 949 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 GPS1Q13098 491 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 TRIP13Q15645 432 aaPredicted RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 C5orf22Q49AR2 442 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 TTC39BQ5VTQ0 682 aaPredicted RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 FBXL22Q6P050 247 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 EMBQ6PCB8 327 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 TMEM184AQ6ZMB5 413 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 C14orf80Q86SX3 495 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 CCDC117Q8IWD4 279 aaPredicted RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 CMTM8Q8IZV2 173 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 SHKBP1Q8TBC3 707 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 HTR3CQ8WXA8 447 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 OLFM3Q96PB7 478 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 QKIQ96PU8 341 aaKnown RBP eCLIP10.59□□□□□ -0.711e-15■■■■■ 29.2
USP3-219ENST00000561326 SLC22A12Q96S37 553 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 PRMT1Q99873 361 aaKnown RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 SLC46A2Q9BY10 475 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 PRDM12Q9H4Q4 367 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 ZNF576Q9H609 170 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 USP29Q9HBJ7 922 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 TMEM248Q9NWD8 314 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 HCFC1R1Q9NWW0 138 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 PAK5Q9P286 719 aa10.59□□□□□ -0.71
USP3-219ENST00000561326 AGO1Q9UL18 857 aaKnown RBP10.59□□□□□ -0.71
USP3-219ENST00000561326 NFU1Q9UMS0 254 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms