RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 LGMNQ99538 433 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 HTATIP2Q9BUP3 242 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ROPN1BQ9BZX4 212 aaPredicted RBP17.62■□□□□ 0.41
HDDC3-206ENST00000561036 RETREG1Q9H6L5 497 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 ROPN1Q9HAT0 212 aaPredicted RBP17.62■□□□□ 0.41
HDDC3-206ENST00000561036 NINJ2Q9NZG7 142 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 XPO7Q9UIA9 1087 aaKnown RBP17.62■□□□□ 0.41
HDDC3-206ENST00000561036 CLUHO75153 1309 aa17.62■□□□□ 0.41
HDDC3-206ENST00000561036 IGLV3-10A0A075B6K4 115 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 HMGB1P1B2RPK0 211 aaPredicted RBP17.61■□□□□ 0.41
HDDC3-206ENST00000561036 E9PAM4 449 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 TBX18O95935 607 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 ATP2A2P16615 1042 aaKnown RBP17.61■□□□□ 0.41
HDDC3-206ENST00000561036 TPSB2P20231 275 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 BMPR1AP36894 532 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 GARSP41250 739 aaKnown RBP17.61■□□□□ 0.41
HDDC3-206ENST00000561036 AP1B1Q10567 949 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 SEMA5AQ13591 1074 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 TPSAB1Q15661 275 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 ANKRD20A2Q5SQ80 823 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 ANKRD20A1Q5TYW2 823 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 AGBL2Q5U5Z8 902 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 ANKRD20A3Q5VUR7 823 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 ZNF683Q8IZ20 524 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 NPWQ8N729 165 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 KLHL23Q8NBE8 558 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 CCNYQ8ND76 341 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 TSGA13Q96PP4 275 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 VAT1Q99536 393 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 CCSER2Q9H7U1 834 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 SAYSD1Q9NPB0 183 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 INSL5Q9Y5Q6 135 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 IRAK3Q9Y616 596 aa17.61■□□□□ 0.41
HDDC3-206ENST00000561036 RNF103O00237 685 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 TLL1O43897 1013 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 TCEA3O75764 348 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 CXCL14O95715 111 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 MOCS2O96007 188 aaPredicted RBP17.6■□□□□ 0.41
HDDC3-206ENST00000561036 CNPP09543 421 aaKnown RBP17.6■□□□□ 0.41
HDDC3-206ENST00000561036 RHOQP17081 205 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 DNAJB2P25686 324 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 TWF1Q12792 350 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 AUHQ13825 339 aaKnown RBP17.6■□□□□ 0.41
HDDC3-206ENST00000561036 KYNUQ16719 465 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 MS4A13Q5J8X5 152 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 C6orf118Q5T5N4 469 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 PIK3R6Q5UE93 754 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 AFMIDQ63HM1 303 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 MIB1Q86YT6 1006 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 RTL3Q8N8U3 475 aaKnown RBP17.6■□□□□ 0.41
HDDC3-206ENST00000561036 OR2W6PQ8NHA6 318 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 AUTS2Q8WXX7 1259 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 PSMG2Q969U7 264 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 AZIN2Q96A70 460 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 PLD4Q96BZ4 506 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 ATP6V1G3Q96LB4 118 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 PWWP2AQ96N64 755 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 LBHD1Q9BQE6 289 aaPredicted RBP17.6■□□□□ 0.41
HDDC3-206ENST00000561036 ETNK1Q9HBU6 452 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 EIF2B3Q9NR50 452 aaKnown RBP17.6■□□□□ 0.41
HDDC3-206ENST00000561036 VPS18Q9P253 973 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 TRHDEQ9UKU6 1024 aa17.6■□□□□ 0.41
HDDC3-206ENST00000561036 GOLGA6CA6NDK9 693 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 DRGXA6NNA5 263 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 POLR3GO15318 223 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-206ENST00000561036 TMEM63AO94886 807 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 C1RP00736 705 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 ADH1AP07327 375 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 GOLGA6DP0CG33 693 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 CCNCP24863 283 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 NRLP54845 237 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 UBE3AQ05086 875 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 WASHC5Q12768 1159 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 PDIA2Q13087 525 aaKnown RBP17.59■□□□□ 0.41
HDDC3-206ENST00000561036 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 KRT71Q3SY84 523 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 PABPC1LQ4VXU2 614 aaKnown RBP17.59■□□□□ 0.41
HDDC3-206ENST00000561036 LILRA6Q6PI73 481 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 CCDC149Q6ZUS6 474 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 RTL10Q7L3V2 364 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 DNAJB7Q7Z6W7 309 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-206ENST00000561036 C14orf80Q86SX3 495 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 CCDC13Q8IYE1 715 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 ARL8AQ96BM9 186 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 PRMT1Q99873 361 aaKnown RBP17.59■□□□□ 0.41
HDDC3-206ENST00000561036 CCDC77Q9BR77 488 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 EMILIN2Q9BXX0 1053 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 ZYG11BQ9C0D3 744 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 DNAJC17Q9NVM6 304 aaKnown RBP17.59■□□□□ 0.41
HDDC3-206ENST00000561036 GOLGA6AQ9NYA3 693 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 IGSF9Q9P2J2 1179 aa17.59■□□□□ 0.41
HDDC3-206ENST00000561036 ZMYND8Q9ULU4 1186 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-206ENST00000561036 TCRBV7S3A2A0A539 114 aa17.58■□□□□ 0.4
HDDC3-206ENST00000561036 METTL18O95568 372 aa17.58■□□□□ 0.4
HDDC3-206ENST00000561036 ACSL3O95573 720 aa17.58■□□□□ 0.4
HDDC3-206ENST00000561036 SHBGP04278 402 aa17.58■□□□□ 0.4
HDDC3-206ENST00000561036 IVLP07476 585 aa17.58■□□□□ 0.4
HDDC3-206ENST00000561036 NDST2P52849 883 aa17.58■□□□□ 0.4
HDDC3-206ENST00000561036 SARNPP82979 210 aaKnown RBP17.58■□□□□ 0.4
HDDC3-206ENST00000561036 STAT4Q14765 748 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms