RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CDAN1Q8IWY9 1227 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 PLD6Q8N2A8 252 aaKnown RBP16.9■□□□□ 0.3
TPM1-228ENST00000560975 TMEM102Q8N9M5 508 aaPredicted RBP16.9■□□□□ 0.3
TPM1-228ENST00000560975 PDCD2LQ9BRP1 358 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 WDR41Q9HAD4 459 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 CDY2AQ9Y6F7 541 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 CDY1Q9Y6F8 540 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 MYO18AQ92614 2054 aaKnown RBP16.9■□□□□ 0.3
TPM1-228ENST00000560975 PRSS51A0A1B0GVH4 220 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 RGSL1A5PLK6 1076 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 H6PDO95479 791 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 ZNF26P17031 533 aaPredicted RBP16.9■□□□□ 0.3
TPM1-228ENST00000560975 ME2P23368 584 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 DACT2Q5SW24 774 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 ELMSAN1Q6PJG2 1045 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 MCF2L2Q86YR7 1114 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 HACE1Q8IYU2 909 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 PIWIL1Q96J94 861 aaKnown RBP16.9■□□□□ 0.3
TPM1-228ENST00000560975 BARX2Q9UMQ3 279 aaPredicted RBP16.9■□□□□ 0.3
TPM1-228ENST00000560975 CROCCQ5TZA2 2017 aa16.9■□□□□ 0.3
TPM1-228ENST00000560975 PLOD2O00469 737 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 PDGFRAP16234 1089 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 MX2P20592 715 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 MPSTP25325 297 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 SLC5A3P53794 718 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 PDAP1Q13442 181 aaKnown RBP16.89■□□□□ 0.29
TPM1-228ENST00000560975 ART3Q13508 389 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 CA9Q16790 459 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 SLC27A3Q5K4L6 730 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 STXBP5Q5T5C0 1151 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 CYP4V2Q6ZWL3 525 aaPredicted RBP16.89■□□□□ 0.29
TPM1-228ENST00000560975 ZBTB46Q86UZ6 589 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 UBA3Q8TBC4 463 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 RXFP2Q8WXD0 754 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 TRPV6Q9H1D0 765 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 TBCCD1Q9NVR7 557 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 PADI4Q9UM07 663 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 ZNF831Q5JPB2 1677 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 TRIM43BA6NCK2 446 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 H0YCG3 227 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 CHRNGP07510 517 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 KRT19P08727 400 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 COL6A2P12110 1019 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 IL4RP24394 825 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 CNTFP26441 200 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 MAGEA3P43357 314 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 OSTNP61366 133 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 PRAMEP78395 509 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 STILQ15468 1287 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 GRAMD4Q6IC98 578 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 TRNP1Q6NT89 227 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 CROCCP3Q8IVE0 287 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 SLC4A11Q8NBS3 891 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 MCUQ8NE86 351 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 PCDH19Q8TAB3 1148 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 ACMSDQ8TDX5 336 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 LRTOMTQ8WZ04 291 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 NPAS2Q99743 824 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 ACO2Q99798 780 aaKnown RBP16.89■□□□□ 0.29
TPM1-228ENST00000560975 TUT1Q9H6E5 874 aaKnown RBP16.89■□□□□ 0.29
TPM1-228ENST00000560975 NGRNQ9NPE2 291 aaKnown RBP16.89■□□□□ 0.29
TPM1-228ENST00000560975 TXNDC16Q9P2K2 825 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 MYRFQ9Y2G1 1151 aa16.89■□□□□ 0.29
TPM1-228ENST00000560975 ERVK-10P10266 1014 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 PTGER2P43116 358 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 ALDH3B2P48448 385 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 LSM12Q3MHD2 195 aaKnown RBP16.88■□□□□ 0.29
TPM1-228ENST00000560975 SLC9A4Q6AI14 798 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 FASTKD5Q7L8L6 764 aaKnown RBP16.88■□□□□ 0.29
TPM1-228ENST00000560975 PODNQ7Z5L7 613 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 CDKL2Q92772 493 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 INO80BQ9C086 356 aaPredicted RBP16.88■□□□□ 0.29
TPM1-228ENST00000560975 PAIP1Q9H074 479 aaKnown RBP16.88■□□□□ 0.29
TPM1-228ENST00000560975 C20orf96Q9NUD7 363 aaPredicted RBP16.88■□□□□ 0.29
TPM1-228ENST00000560975 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 XPOTO43592 962 aaKnown RBP16.88■□□□□ 0.29
TPM1-228ENST00000560975 ENTPD3O75355 529 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 GLDCP23378 1020 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 ASPAP45381 313 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 NETO2Q8NC67 525 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 RNF169Q8NCN4 708 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 RMND5BQ96G75 393 aaPredicted RBP16.88■□□□□ 0.29
TPM1-228ENST00000560975 PXMP2Q9NR77 195 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 BCAP29Q9UHQ4 241 aa16.88■□□□□ 0.29
TPM1-228ENST00000560975 M0QYV0 167 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 ENDOD1O94919 500 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 PORP16435 677 aaPredicted RBP16.87■□□□□ 0.29
TPM1-228ENST00000560975 GPD1P21695 349 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 CNTN2Q02246 1040 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 OR6B2Q6IFH4 312 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 RANBP9Q96S59 729 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 SLC29A1Q99808 456 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 PCDHAC1Q9H158 963 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 DHX35Q9H5Z1 703 aaKnown RBP16.87■□□□□ 0.29
TPM1-228ENST00000560975 SELENONQ9NZV5 590 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 HMGXB4Q9UGU5 601 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 H3BNH8 94 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 MGAT1P26572 445 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms