RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 NXPH1P58417 271 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 DAB2P98082 770 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 INSM1Q01101 510 aaPredicted RBP18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 KCNC4Q03721 635 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 HNRNPA1L2Q32P51 320 aaKnown RBP18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 MPP7Q5T2T1 576 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 MFN1Q8IWA4 741 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 ZC3H3Q8IXZ2 948 aaKnown RBP18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 DCBLD1Q8N8Z6 715 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 ZNF578Q96N58 590 aaPredicted RBP18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 MMRN2Q9H8L6 949 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 EXOC1Q9NV70 894 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 STIM2Q9P246 746 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 NAV2Q8IVL1 2488 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 CFAP46Q8IYW2 2715 aa18.52■□□□□ 0.56
TSPAN3-208ENST00000560514 CUTAO60888 179 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 MT-CO3P00414 261 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 ACP1P24666 158 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 GCLMP48507 274 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 SLC11A2P49281 568 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 CUL4BQ13620 913 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 KCNJ12Q14500 433 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 SFMBT2Q5VUG0 894 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 PM20D1Q6GTS8 502 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 PRPF39Q86UA1 669 aaKnown RBP18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 LSMEM2Q8N112 164 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 FAM181AQ8N9Y4 354 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 ANKRD52Q8NB46 1076 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 TMEM174Q8WUU8 243 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 NDRG1Q92597 394 aaKnown RBP18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 EDEM1Q92611 657 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 SNX21Q969T3 373 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 IRX2Q9BZI1 471 aaPredicted RBP18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 FAM13BQ9NYF5 915 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 CEP83Q9Y592 693 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 ARID1BQ8NFD5 2236 aaPredicted RBP18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 MGAQ8IWI9 3026 aa18.51■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3DA0A087WVF3 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3IA0A087WXS9 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3EA0A087X179 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3KA0A087X1G2 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3FA6NER0 549 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 B8ZZF3 427 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3LB9A6J9 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 PDXKO00764 312 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 WNT9AO14904 365 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 IRAK2O43187 625 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 CALUO43852 315 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3HP0C7X1 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 KRT13P13646 458 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 GOT1P17174 413 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 CSKP41240 450 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 PSMD8P48556 350 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 SGSHP51688 502 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 RNF219Q5W0B1 726 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 BSPRYQ5W0U4 402 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3GQ6DHY5 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3CQ6IPX1 549 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 NAPEPLDQ6IQ20 393 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 RFWD3Q6PCD5 774 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 SHC4Q6S5L8 630 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 UNC45BQ8IWX7 931 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TBC1D3Q8IZP1 549 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 SIX6OS1Q8N1H7 587 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 MFSD2AQ8NA29 543 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 WFDC5Q8TCV5 224 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TAS1R2Q8TE23 839 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TTC17Q96AE7 1141 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 CPNE5Q9HCH3 593 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 ABCC13Q9NSE7 274 aa18.5■□□□□ 0.55
TSPAN3-208ENST00000560514 TARSL2A2RTX5 802 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 ARHGAP6O43182 974 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 MSI1O43347 362 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 MOCS3O95396 460 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 ADH1BP00325 375 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 C5AR1P21730 350 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 ADPRHP54922 357 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 STK4Q13043 487 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 CDH18Q13634 790 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 PKDCCQ504Y2 493 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 C9orf64Q5T6V5 341 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 PIK3R6Q5UE93 754 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 NUGGCQ68CJ6 796 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 INTS8Q75QN2 995 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 KCNE4Q8WWG9 221 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 DDX50Q9BQ39 737 aaKnown RBP18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 HESX1Q9UBX0 185 aa18.49■□□□□ 0.55
TSPAN3-208ENST00000560514 ATMQ13315 3056 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 MYO18BQ8IUG5 2567 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 EDDM13A0A1B0GTR0 161 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 XPO1O14980 1071 aaKnown RBP18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 SDC3O75056 442 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 TRIM49P0CI25 452 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 TRIM49CP0CI26 452 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 C6P13671 934 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 ADIGQ0VDE8 80 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 OVGP1Q12889 678 aa18.48■□□□□ 0.55
TSPAN3-208ENST00000560514 STAT4Q14765 748 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms