RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 NUP93Q8N1F7 819 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 RIN3Q8TB24 985 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 DQX1Q8TE96 717 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 C2orf15Q8WU43 125 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 MYLIPQ8WY64 445 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 CASP10Q92851 521 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 WBP2Q969T9 261 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 PSMG2Q969U7 264 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ZNF707Q96C28 371 aaPredicted RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 MRPL38Q96DV4 380 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 SPATA17Q96L03 361 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 NOX5Q96PH1 765 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SLC2A13Q96QE2 648 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 HHIPQ96QV1 700 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SLC22A12Q96S37 553 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 NOTCH4Q99466 2003 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 LRRC3Q9BY71 257 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TSGA10Q9BZW7 698 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TLE6Q9H808 572 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ZWILCHQ9H900 591 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 TRPC7Q9HCX4 862 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 NGRNQ9NPE2 291 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 PCMTD2Q9NV79 361 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 PARVAQ9NVD7 372 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 PCSK1NQ9UHG2 260 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SFMBT1Q9UHJ3 866 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 XPO7Q9UIA9 1087 aaKnown RBP5.44□□□□□ -1.54
SPG11-220ENST00000559933 RASAL2Q9UJF2 1139 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 INTUQ9ULD6 942 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 IRAK3Q9Y616 596 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 MTCH2Q9Y6C9 303 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 SCINQ9Y6U3 715 aa5.44□□□□□ -1.54
SPG11-220ENST00000559933 ANAPC1Q9H1A4 1944 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 MTCL1Q9Y4B5 1905 aaKnown RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 A0A0A6YYK5 440 aaPredicted RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 SIGLEC16A6NMB1 481 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 BTNL10A8MVZ5 291 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 PI4K2BG5E9Z4 385 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 ZNF185O15231 689 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 COCHO43405 550 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 SPOPO43791 374 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 HSF2BPO75031 334 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 ADAM11O75078 769 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 TBX10O75333 385 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 MOSPD3O75425 235 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 LRCH4O75427 683 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 MTA2O94776 668 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 FBXO21O94952 628 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 IRF1P10914 325 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 RARGP13631 454 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 PDGFRAP16234 1089 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 CEBPBP17676 345 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 GABRR2P28476 465 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 CXCR5P32302 372 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 TUFMP49411 452 aaKnown RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 NUMBP49757 651 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 EPHB3P54753 998 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 HDAC4P56524 1084 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 RPL10AP62906 217 aaKnown RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 ZXDBP98169 803 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 EFEMP1Q12805 493 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 SMARCB1Q12824 385 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 KCNC3Q14003 757 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 VEPH1Q14D04 833 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 TEAD2Q15562 447 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 CA9Q16790 459 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 KCNT1Q5JUK3 1230 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 FAM182AQ5T1J6 154 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 C10orf76Q5T2E6 689 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 DCAF12L1Q5VU92 463 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 TXNDC8Q6A555 127 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 PM20D1Q6GTS8 502 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 C11orf63Q6NUN7 778 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 SYCE2Q6PIF2 218 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 GRASPQ7Z6J2 395 aaPredicted RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 DNAJB7Q7Z6W7 309 aaPredicted RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 NT5DC3Q86UY8 548 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 FAM131BQ86XD5 332 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 MIB1Q86YT6 1006 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 RHOT2Q8IXI1 618 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 PYROXD2Q8N2H3 581 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 CCDC185Q8N715 623 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 NETO2Q8NC67 525 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 MSANTD4Q8NCY6 345 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 ITFG1Q8TB96 612 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 SHKBP1Q8TBC3 707 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 FAM172AQ8WUF8 416 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 PPM1EQ8WY54 764 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 HSPH1Q92598 858 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 ALG3Q92685 438 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 MYEOVQ96EZ4 313 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 FAM46AQ96IP4 442 aaKnown RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 ZNF512Q96ME7 567 aaPredicted RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 GUCD1Q96NT3 240 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 CYP2S1Q96SQ9 504 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 HERPUD2Q9BSE4 406 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 DDX23Q9BUQ8 820 aaKnown RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 UBXN6Q9BZV1 441 aa5.43□□□□□ -1.54
SPG11-220ENST00000559933 BHLHE41Q9C0J9 482 aaPredicted RBP5.43□□□□□ -1.54
SPG11-220ENST00000559933 DNAI2Q9GZS0 605 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms