RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ASLP04424 464 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 CTSKP43235 329 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 GRK6P43250 576 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 RGS7P49802 495 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 CCT8P50990 548 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 TBX4P57082 545 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 LRMPQ12912 555 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 NNTQ13423 1086 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 ARID5BQ14865 1188 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 SUZ12Q15022 739 aaKnown RBP13.6□□□□□ -0.23
TPM1-220ENST00000559556 CNGA2Q16280 664 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 NADSYN1Q6IA69 706 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 MFN1Q8IWA4 741 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 COL27A1Q8IZC6 1860 aaPredicted RBP13.6□□□□□ -0.23
TPM1-220ENST00000559556 HJURPQ8NCD3 748 aaPredicted RBP13.6□□□□□ -0.23
TPM1-220ENST00000559556 FIBINQ8TAL6 211 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 CLEC4CQ8WTT0 213 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 TTC17Q96AE7 1141 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 NT5C1BQ96P26 610 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 ZSWIM1Q9BR11 485 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 GTPBP4Q9BZE4 634 aaKnown RBP13.6□□□□□ -0.23
TPM1-220ENST00000559556 SUN2Q9UH99 717 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 TENM4Q6N022 2769 aa13.6□□□□□ -0.23
TPM1-220ENST00000559556 ASH1LQ9NR48 2969 aaKnown RBP13.59□□□□□ -0.23
TPM1-220ENST00000559556 C10orf142B7Z368 130 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 M0QYV0 167 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 PIK3R2O00459 728 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 FBXO21O94952 628 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 FSBPO95073 299 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 IGHV4-34P06331 123 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 HNRNPA1L2Q32P51 320 aaKnown RBP13.59□□□□□ -0.23
TPM1-220ENST00000559556 LAYNQ6UX15 382 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 KDM1BQ8NB78 822 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 MDM1Q8TC05 714 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 FCRL2Q96LA5 508 aaPredicted RBP13.59□□□□□ -0.23
TPM1-220ENST00000559556 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 PABPC3Q9H361 631 aaKnown RBP13.59□□□□□ -0.23
TPM1-220ENST00000559556 METTL14Q9HCE5 456 aaKnown RBP13.59□□□□□ -0.23
TPM1-220ENST00000559556 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
TPM1-220ENST00000559556 PCDHB4Q9Y5E5 795 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 ITIH6Q6UXX5 1313 aa13.59□□□□□ -0.23
TPM1-220ENST00000559556 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 TYW5A2RUC4 315 aaKnown RBP13.58□□□□□ -0.24
TPM1-220ENST00000559556 H0Y8X5 98 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 RNF225M0QZC1 329 aaPredicted RBP13.58□□□□□ -0.24
TPM1-220ENST00000559556 TNFSF14O43557 240 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 DFNA5O60443 496 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 SIN3BO75182 1162 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 SMC2O95347 1197 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 FYNP06241 537 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 BRD2P25440 801 aaKnown RBP13.58□□□□□ -0.24
TPM1-220ENST00000559556 CSKP41240 450 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 RPL34P49207 117 aaKnown RBP13.58□□□□□ -0.24
TPM1-220ENST00000559556 ST8SIA6P61647 398 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 RACK1P63244 317 aaKnown RBP13.58□□□□□ -0.24
TPM1-220ENST00000559556 CST6Q15828 149 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 INAVAQ3KP66 663 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 KCNT1Q5JUK3 1230 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 KIAA0895LQ68EN5 471 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 PPM1KQ8N3J5 372 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 ENGASEQ8NFI3 743 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 LMO3Q8TAP4 145 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 KAT5Q92993 513 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 SLC39A13Q96H72 371 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 MRGPRX3Q96LB0 322 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 CEP63Q96MT8 703 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 SERPINB11Q96P15 392 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 DDX50Q9BQ39 737 aaKnown RBP13.58□□□□□ -0.24
TPM1-220ENST00000559556 MTG2Q9H4K7 406 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 STIM2Q9P246 746 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 SERGEFQ9UGK8 458 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 ADAMTS1Q9UHI8 967 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 NCKAP1Q9Y2A7 1128 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 TLR6Q9Y2C9 796 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 PIEZO2Q9H5I5 2752 aa13.58□□□□□ -0.24
TPM1-220ENST00000559556 LRP4O75096 1905 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 PSMA7O14818 248 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 VILLO15195 856 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 P4HA2O15460 535 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 GALCP54803 685 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 RPS24P62847 133 aaKnown RBP13.57□□□□□ -0.24
TPM1-220ENST00000559556 GCNT1Q02742 428 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 CAMK2BQ13554 666 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 STIM1Q13586 685 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 CDH18Q13634 790 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 ACAP1Q15027 740 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 SMAD1Q15797 465 aaKnown RBP13.57□□□□□ -0.24
TPM1-220ENST00000559556 MS4A13Q5J8X5 152 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 BEND5Q7L4P6 421 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 ADAT2Q7Z6V5 191 aaKnown RBP13.57□□□□□ -0.24
TPM1-220ENST00000559556 DQX1Q8TE96 717 aaKnown RBP13.57□□□□□ -0.24
TPM1-220ENST00000559556 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 ACE2Q9BYF1 805 aaPredicted RBP13.57□□□□□ -0.24
TPM1-220ENST00000559556 NUCKS1Q9H1E3 243 aaKnown RBP13.57□□□□□ -0.24
TPM1-220ENST00000559556 SCUBE2Q9NQ36 999 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 FBXL12Q9NXK8 326 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 FZD4Q9ULV1 537 aa13.57□□□□□ -0.24
TPM1-220ENST00000559556 A0A1B0GTQ1 180 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms