RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 KAZNQ674X7 775 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 NUGGCQ68CJ6 796 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 SYDE1Q6ZW31 735 aaPredicted RBP17.09■□□□□ 0.33
TPM1-219ENST00000559397 HDXQ7Z353 690 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 DDX42Q86XP3 938 aaKnown RBP eCLIP17.09■□□□□ 0.33
TPM1-219ENST00000559397 CELF5Q8N6W0 485 aaKnown RBP17.09■□□□□ 0.33
TPM1-219ENST00000559397 CCDC185Q8N715 623 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 ATL2Q8NHH9 583 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 IFT81Q8WYA0 676 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 HSPH1Q92598 858 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 FAM114A2Q9NRY5 505 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 FAM53CQ9NYF3 392 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 CFAP97Q9P2B7 532 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 FEZ2Q9UHY8 353 aaPredicted RBP17.09■□□□□ 0.33
TPM1-219ENST00000559397 NFU1Q9UMS0 254 aa17.09■□□□□ 0.33
TPM1-219ENST00000559397 ZNF487B1APH4 448 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 C2CD4DB7Z1M9 353 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 DAPK3O43293 454 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 IL9P15248 144 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 SNX1Q13596 522 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 SCYL2Q6P3W7 929 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 Q6ZNB5 142 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 HTR3DQ70Z44 454 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 UNC45BQ8IWX7 931 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 NTAN1Q96AB6 310 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 SNRNP25Q9BV90 132 aaKnown RBP17.08■□□□□ 0.32
TPM1-219ENST00000559397 FRMD8P1Q9BZ68 369 aaPredicted RBP17.08■□□□□ 0.32
TPM1-219ENST00000559397 TKTL2Q9H0I9 626 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.32
TPM1-219ENST00000559397 OBP2AQ9NY56 170 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 THEGQ9P2T0 379 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 NEU2Q9Y3R4 380 aa17.08■□□□□ 0.32
TPM1-219ENST00000559397 LIASO43766 372 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 ECEL1O95672 775 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 SLC2A3P11169 496 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 SP100P23497 879 aaPredicted RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 CORO1AP31146 461 aaKnown RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 ADRA1BP35368 520 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 CDH6P55285 790 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 DPYSL3Q14195 570 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 CASP8Q14790 479 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 ERMARDQ5T6L9 678 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 PARM1Q6UWI2 310 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 TDRD5Q8NAT2 981 aaKnown RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 ST13P5Q8NFI4 369 aaPredicted RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 GRK7Q8WTQ7 553 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 RNF34Q969K3 372 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 AZIN2Q96A70 460 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 PCDH18Q9HCL0 1135 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 ZFP14Q9HCL3 533 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 TMPRSS4Q9NRS4 437 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 XPO7Q9UIA9 1087 aaKnown RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 FAM50BQ9Y247 325 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 SH3BP1Q9Y3L3 701 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 E2F8A0AVK6 867 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 HEPACAM2A8MVW5 462 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 ANHXE9PGG2 379 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 CST8O60676 142 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 APOEP02649 317 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 IL4RP24394 825 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 HARS2P49590 506 aaKnown RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 AIF1P55008 147 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 SCAPQ12770 1279 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 DPYSL2Q16555 572 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 PSTKQ8IV42 348 aaKnown RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 DENND1CQ8IV53 801 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 MAP7D3Q8IWC1 876 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 SLC35B2Q8TB61 432 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 FGF14Q92915 247 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 ELSPBP1Q96BH3 223 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 FAF2Q96CS3 445 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 BTN2A3PQ96KV6 586 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 STOML2Q9UJZ1 356 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 AGO1Q9UL18 857 aaKnown RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 FZD10Q9ULW2 581 aa17.07■□□□□ 0.32
TPM1-219ENST00000559397 DRG1Q9Y295 367 aaKnown RBP17.07■□□□□ 0.32
TPM1-219ENST00000559397 KIF26AQ9ULI4 1882 aaPredicted RBP17.06■□□□□ 0.32
TPM1-219ENST00000559397 PAGE1O75459 146 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 PTK6Q13882 451 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
TPM1-219ENST00000559397 CA9Q16790 459 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 ARL13BQ3SXY8 428 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 VITQ6UXI7 678 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 MTSS1LQ765P7 747 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 KIAA1958Q8N8K9 716 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 ATP6V0D2Q8N8Y2 350 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 BPIFB1Q8TDL5 484 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 E2F7Q96AV8 911 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 RNF157Q96PX1 679 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 HAPLN3Q96S86 360 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 CALN1Q9BXU9 219 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 MAGEB5Q9BZ81 275 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 PLA2G2FQ9BZM2 168 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 DPH5Q9H2P9 285 aa17.06■□□□□ 0.32
TPM1-219ENST00000559397 VIPAS39Q9H9C1 493 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms