RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 HSD3B7Q9H2F3 369 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 FBRSQ9HAH7 460 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 CBX8Q9HC52 389 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ZDHHC4Q9NPG8 344 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 CACNA2D2Q9NY47 1150 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 THAP10Q9P2Z0 257 aaPredicted RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 SUN2Q9UH99 717 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 USP18Q9UMW8 372 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 PCDHGA5Q9Y5G8 931 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNX1-205ENST00000559339 BZW2Q9Y6E2 419 aaKnown RBP4.52□□□□□ -1.69
SNX1-205ENST00000559339 STON1Q9Y6Q2 735 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 MIA3Q5JRA6 1907 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 DENND4CQ5VZ89 1909 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 ANAPC1Q9H1A4 1944 aa4.52□□□□□ -1.69
SNX1-205ENST00000559339 FAM186AA6NE01 2351 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 A0A1W2PQF6 199 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 A0A1W2PQJ5 194 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 FAM170AA1A519 330 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 WASH3PC4AMC7 463 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 SRGAP2O75044 1071 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 NDUFS2O75306 463 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 DNTTP04053 509 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 MYBL1P10243 752 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 CHRNB2P17787 502 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 GABRG2P18507 467 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 OXTRP30559 389 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 OR1E1P30953 314 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 CD70P32970 193 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 FLT3P36888 993 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 ETFBP38117 255 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 MPLP40238 635 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 P2RY2P41231 377 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 IL12RB1P42701 662 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 DHPSP49366 369 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 CXCR3P49682 368 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 SGSHP51688 502 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 CDH4P55283 916 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 GSCP56915 257 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 PITX1P78337 314 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 KRT83P78385 493 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 ATP11AP98196 1134 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 ECT2LQ008S8 904 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 RPL6Q02878 288 aaKnown RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 CREB5Q02930 508 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 ZBTB16Q05516 673 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 SPEM2Q0P670 501 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 LMAN2Q12907 356 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 EIF4EBP2Q13542 120 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 AUHQ13825 339 aaKnown RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 CSRP2Q16527 193 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 CLEC16AQ2KHT3 1053 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 FUT11Q495W5 492 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 PLK5Q496M5 336 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 TTC31Q49AM3 519 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 AASDHQ4L235 1098 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 C2CD6Q53TS8 623 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 TDRD12Q587J7 1177 aaKnown RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 FIGNQ5HY92 759 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 PITRM1Q5JRX3 1037 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 SYCP2LQ5T4T6 812 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 C6orf118Q5T5N4 469 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 LYSMD4Q5XG99 296 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 ACAD10Q6JQN1 1059 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 FBXL22Q6P050 247 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 DNAJC24Q6P3W2 148 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 KIAA1324Q6UXG2 1013 aaKnown RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 STRADAQ7RTN6 431 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 APTXQ7Z2E3 356 aaKnown RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 RABEPKQ7Z6M1 372 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 KIAA0907Q7Z7F0 614 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 SETD3Q86TU7 594 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 KBTBD6Q86V97 674 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 FAM131BQ86XD5 332 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 PHF13Q86YI8 300 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 TMPRSS6Q8IU80 811 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 CCAR2Q8N163 923 aaKnown RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 DCLK2Q8N568 766 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.51□□□□□ -1.69
SNX1-205ENST00000559339 KDM1BQ8NB78 822 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 C3orf20Q8ND61 904 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 CYB5D2Q8WUJ1 264 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 RLN3Q8WXF3 142 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 SORCS1Q8WY21 1168 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 SYN2Q92777 582 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 TRIM11Q96F44 468 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 SIPA1Q96FS4 1042 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 VCPIP1Q96JH7 1222 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 MRGPRX1Q96LB2 322 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 C1orf74Q96LT6 269 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 PRICKLE1Q96MT3 831 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 NAP1L5Q96NT1 182 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 ACOX2Q99424 681 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 TBCBQ99426 244 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.51□□□□□ -1.69
SNX1-205ENST00000559339 C2orf49Q9BVC5 232 aaPredicted RBP4.51□□□□□ -1.69
SNX1-205ENST00000559339 MUC3BQ9H195 1237 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 TMEM245Q9H330 911 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 TSPY26PQ9H489 355 aa4.51□□□□□ -1.69
SNX1-205ENST00000559339 HAUS4Q9H6D7 363 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms