RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ACLYP53396 1101 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 NOGQ13253 232 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 PRPSAP1Q14558 356 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 PAN2Q504Q3 1202 aaKnown RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 SPANXN3Q5MJ09 141 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 STXBP5Q5T5C0 1151 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 FAM72AQ5TYM5 149 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 FAM72DQ6L9T8 149 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 CD300LGQ6UXG3 332 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 FAM43BQ6ZT52 329 aaPredicted RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 SLC24A5Q71RS6 500 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 OTOAQ7RTW8 1153 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 FAM72BQ86X60 149 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 MPP5Q8N3R9 675 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 ZNF276Q8N554 614 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 RAB3IL1Q8TBN0 382 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 FAM111AQ96PZ2 611 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 HAPLN3Q96S86 360 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 SRPK1Q96SB4 655 aaKnown RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 ECT2Q9H8V3 914 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 SLCO1B3Q9NPD5 702 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 TRMT13Q9NUP7 481 aaKnown RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 TXLNGQ9NUQ3 528 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 PLLPQ9Y342 182 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 TSC2P49815 1807 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 TMEM189-UBE2V1I3L0A0 370 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 AP2A1O95782 977 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 CSH1P0DML2 217 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 CSH2P0DML3 217 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 CRHR1P34998 444 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 GARSP41250 739 aaKnown RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 FRG1Q14331 258 aaKnown RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 DBN1Q16643 649 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 BTBD8Q5XKL5 378 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 ATG16L1Q676U5 607 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 CYB5D1Q6P9G0 228 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 TAC4Q86UU9 113 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 DCP1BQ8IZD4 617 aaKnown RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 LZTR1Q8N653 840 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 OR10T2Q8NGX3 314 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 DQX1Q8TE96 717 aaKnown RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 ATP2A3Q93084 1043 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 OXNAD1Q96HP4 312 aaPredicted RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 RMDN2Q96LZ7 410 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 PPP1R2P1Q96PQ5 205 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 ZIC5Q96T25 663 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 TSSK1BQ9BXA7 367 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 TRIM55Q9BYV6 548 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 LRRC40Q9H9A6 602 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 SMYD2Q9NRG4 433 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 ARHGEF38Q9NXL2 777 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 BFARQ9NZS9 450 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 TXNDC16Q9P2K2 825 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 HTTP42858 3142 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 WDR91A4D1P6 747 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 C2CD2LO14523 706 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 FGF10O15520 208 aaPredicted RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 RFPL1O75677 317 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 IGLV3-25P01717 112 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 COL6A1P12109 1028 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 IBSPP21815 317 aaPredicted RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 MGAT1P26572 445 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 GRIK1P39086 918 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 SERPINB4P48594 390 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 RABGGTBP53611 331 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 SESN2P58004 480 aaPredicted RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 TEX44Q53QW1 395 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 MAP3K21Q5TCX8 1036 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 TRMT10BQ6PF06 316 aaKnown RBP11.58□□□□□ -0.56
CLPX-204ENST00000559152 CCDC91Q7Z6B0 441 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 FTHL17Q9BXU8 183 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 GBA3Q9H227 469 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 CATSPERBQ9H7T0 1116 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 ANLNQ9NQW6 1124 aa11.58□□□□□ -0.56
CLPX-204ENST00000559152 KCNK1O00180 336 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 BIRC5O15392 142 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 LRIG2O94898 1065 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 CKBP12277 381 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 CCNB1P14635 433 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 ELNP15502 786 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 CCR1P32246 355 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 NPY2RP49146 381 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 RASSF2P50749 326 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 MGAT5Q09328 741 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 NIPAL4Q0D2K0 466 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 CRYMQ14894 314 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 NFE2Q16621 373 aaPredicted RBP11.57□□□□□ -0.56
CLPX-204ENST00000559152 KYAT3Q6YP21 454 aaKnown RBP11.57□□□□□ -0.56
CLPX-204ENST00000559152 LRRTM3Q86VH5 581 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 SUGP1Q8IWZ8 645 aaKnown RBP11.57□□□□□ -0.56
CLPX-204ENST00000559152 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 C10orf82Q8WW14 230 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 KLHL29Q96CT2 875 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 FUBP3Q96I24 572 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLPX-204ENST00000559152 TUBB6Q9BUF5 446 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 RHOBTB2Q9BYZ6 727 aa11.57□□□□□ -0.56
CLPX-204ENST00000559152 TMLHEQ9NVH6 421 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms