RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 C17orf100A8MU93 164 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FAM90A22PA8MWA6 464 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FAM90A12PA8MX19 464 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FAM90A23PA8MXZ1 464 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 H3BNC9 293 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ZNF213O14771 459 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FYB1O15117 783 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PEX1O43933 1283 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 DHX16O60231 1041 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 TMPRSS11DO60235 418 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 USO1O60763 962 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 URI1O94763 535 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 GFPT2O94808 682 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CYP3A4P08684 503 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CYP2D6P10635 497 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 APEHP13798 732 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 NDUFS1P28331 727 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 MAPK4P31152 587 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 MAN1A1P33908 653 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PGM1P36871 562 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FOLR3P41439 243 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 HARS2P49590 506 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 AGTR2P50052 363 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CDK7P50613 346 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 NXPH1P58417 271 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 SUMO2P61956 95 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 DCAF7P61962 342 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 VAMP2P63027 116 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CYP4F2P78329 520 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 TXNL4AP83876 142 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 SHC2P98077 582 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CDK18Q07002 472 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.82□□□□□ -2.12
USP3-209ENST00000558925 BMPR2Q13873 1038 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CBFBQ13951 182 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PTPRRQ15256 657 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 GPR68Q15743 365 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 TBCEQ15813 527 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 NFIL3Q16649 462 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ARL13AQ5H913 290 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 WDR45BQ5MNZ6 344 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CBWD5Q5RIA9 395 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 SH2D4BQ5SQS7 431 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FAM69AQ5T7M9 428 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 TEDDM1Q5T9Z0 273 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 KIAA0895LQ68EN5 471 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ANO7Q6IWH7 933 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 MZT2BQ6NZ67 158 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 KCNV1Q6PIU1 500 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 C16orf54Q6UWD8 224 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 NAPRTQ6XQN6 538 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 Q6YL49 198 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 Q6ZNX1 250 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ZNF551Q7Z340 670 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 R3HCC1LQ7Z5L2 792 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 C1QL2Q7Z5L3 287 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 GRASPQ7Z6J2 395 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 MON1AQ86VX9 555 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CNTROBQ8N137 903 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 VPS52Q8N1B4 723 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 SIRT6Q8N6T7 355 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ANKRD44Q8N8A2 993 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PTGR2Q8N8N7 351 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 PNPLA1Q8N8W4 532 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FSIP1Q8NA03 581 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 OVCA2Q8WZ82 227 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 KCNJ9Q92806 393 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 RSPRY1Q96DX4 576 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ELP4Q96EB1 424 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 RNFT2Q96EX2 444 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 EDC3Q96F86 508 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 MASTLQ96GX5 879 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 KAZALD1Q96I82 304 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 APOPT1Q96IL0 206 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 VPS50Q96JG6 964 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PGBD1Q96JS3 809 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 FAR2Q96K12 515 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 GPR78Q96P69 363 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PIGSQ96S52 555 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 CLSTN3Q9BQT9 956 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ALG8Q9BVK2 526 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 LMAN2LQ9H0V9 348 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PLEKHA5Q9HAU0 1116 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 BRF2Q9HAW0 419 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PDE11AQ9HCR9 933 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 TRIM36Q9NQ86 728 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 PCDHB16Q9NRJ7 776 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 OLA1Q9NTK5 396 aaKnown RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 THAP1Q9NVV9 213 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 MTMR4Q9NYA4 1195 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ORC3Q9UBD5 711 aaPredicted RBP1.82□□□□□ -2.12
USP3-209ENST00000558925 MGAT4CQ9UBM8 478 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 HDAC6Q9UBN7 1215 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 NRBP1Q9UHY1 535 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 AMFRQ9UKV5 643 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 BAG5Q9UL15 447 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 TBX20Q9UMR3 447 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 NFU1Q9UMS0 254 aa1.82□□□□□ -2.12
USP3-209ENST00000558925 ADAMTS5Q9UNA0 930 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms