RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 VSTM1Q6UX27 236 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 C16orf89Q6UX73 402 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 SLC39A5Q6ZMH5 540 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 SYNE3Q6ZMZ3 975 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 ARMC8Q8IUR7 673 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 LINC01465Q8N7H1 131 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 ZCCHC10Q8TBK6 192 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 ARRDC3Q96B67 414 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 DAZAP1Q96EP5 407 aaKnown RBP4.89□□□□□ -1.63
CASC4-206ENST00000558847 TRMT61AQ96FX7 289 aaKnown RBP4.89□□□□□ -1.63
CASC4-206ENST00000558847 HIC2Q96JB3 615 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 C7orf26Q96N11 449 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 FYTTD1Q96QD9 318 aaKnown RBP4.89□□□□□ -1.63
CASC4-206ENST00000558847 TRIM2Q9C040 744 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 SFXN1Q9H9B4 322 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 SMC4Q9NTJ3 1288 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 PPP1R14DQ9NXH3 145 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 ASAP1Q9ULH1 1129 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 ENTPD2Q9Y5L3 495 aa4.89□□□□□ -1.63
CASC4-206ENST00000558847 COPG1Q9Y678 874 aaKnown RBP4.89□□□□□ -1.63
CASC4-206ENST00000558847 AGAP5A6NIR3 686 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 LINC00473A8K010 186 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 BTBD19C9JJ37 291 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 M0QYT0 321 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 PEX12O00623 359 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 TSPAN4O14817 238 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 EIF5BO60841 1220 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 TULP3O75386 442 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 METTL18O95568 372 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 CD4P01730 458 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 HNRNPA1P09651 372 aaKnown RBP eCLIP4.88□□□□□ -1.63
CASC4-206ENST00000558847 ELFN1P0C7U0 828 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 CD38P28907 300 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 CXCR5P32302 372 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 CLK3P49761 638 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 CLNS1AP54105 237 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 OAZ1P54368 228 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 FOXL2P58012 376 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 FAM3BP58499 235 aaPredicted RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 C21orf58P58505 322 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 WDR5P61964 334 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 RAE1P78406 368 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 SIM1P81133 766 aaPredicted RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 PSG6Q00889 435 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 HNRNPA0Q13151 305 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 ZNF169Q14929 603 aaPredicted RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 ZKSCAN2Q63HK3 967 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 ACAD10Q6JQN1 1059 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 MZT2BQ6NZ67 158 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 CEP85Q6P2H3 762 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 C1orf122Q6ZSJ8 110 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 LAS2Q8IYD9 372 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 TERB1Q8NA31 727 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 AKAP1Q92667 903 aaKnown RBP eCLIP4.88□□□□□ -1.63
CASC4-206ENST00000558847 ZBTB10Q96DT7 871 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 PDLIM2Q96JY6 352 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 LENG8Q96PV6 779 aaPredicted RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 CD180Q99467 661 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 CIPCQ9C0C6 399 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 PAIP1Q9H074 479 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 PDCL3Q9H2J4 239 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 TAOK3Q9H2K8 898 aa4.88□□□□□ -1.63
CASC4-206ENST00000558847 OLA1Q9NTK5 396 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 LAS1LQ9Y4W2 734 aaKnown RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 SIRT4Q9Y6E7 314 aaPredicted RBP4.88□□□□□ -1.63
CASC4-206ENST00000558847 H3BNC9 293 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 H7C1Q1 480 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 PRAMEF2O60811 474 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 MT-CO3P00414 261 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 CYP21A2P08686 494 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 DRD4P21917 467 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 PAFAH1B1P43034 410 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 RPS6KA3P51812 740 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 COPB1P53618 953 aaKnown RBP4.87□□□□□ -1.63
CASC4-206ENST00000558847 NR1H2P55055 460 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 ALKBH1Q13686 389 aaKnown RBP4.87□□□□□ -1.63
CASC4-206ENST00000558847 CAMK1Q14012 370 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 FAM180BQ6P0A1 224 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 PRIMA1Q86XR5 153 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 STAMQ92783 540 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 RNF125Q96EQ8 232 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 RRP36Q96EU6 259 aaKnown RBP4.87□□□□□ -1.63
CASC4-206ENST00000558847 NAF1Q96HR8 494 aaKnown RBP4.87□□□□□ -1.63
CASC4-206ENST00000558847 MMS19Q96T76 1030 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 WDR26Q9H7D7 661 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 ERVK-5Q9HDB9 667 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 ALKBH4Q9NXW9 302 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 CYP46A1Q9Y6A2 500 aa4.87□□□□□ -1.63
CASC4-206ENST00000558847 A0A087X0M5 115 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 GOLGA6L10A0A0M3HER8 536 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 A0A1B0GX30 115 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 UBE2Q2LH0YL09 131 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 GRM8O00222 908 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 USP12O75317 370 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 TBX18O95935 607 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 CSF1P09603 554 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 APEHP13798 732 aaKnown RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 CHMP24386 653 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 PRKCHP24723 683 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms