RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ASCL5Q7RTU5 278 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 TMC6Q7Z403 805 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 KIAA0907Q7Z7F0 614 aaPredicted RBP14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 APCDD1Q8J025 514 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 TSTD1Q8NFU3 115 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 FIBINQ8TAL6 211 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 FAM172AQ8WUF8 416 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 SYN2Q92777 582 aaPredicted RBP14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 RPRD1AQ96P16 312 aaPredicted RBP14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 TRIM7Q9C029 511 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 SLC6A17Q9H1V8 727 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 THAP10Q9P2Z0 257 aaPredicted RBP14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 MYO1AQ9UBC5 1043 aa14.29□□□□□ -0.12
TSPAN3-205ENST00000558745 SDK1Q7Z5N4 2213 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 A0A087X0T9 212 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 A0A1W2PQF6 199 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 H0Y626 953 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 DCLK1O15075 740 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CCP110O43303 1012 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 SRGAP2O75044 1071 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 LUC7L3O95232 432 aaKnown RBP14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 FAM228BP0C875 321 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 GZMAP12544 262 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 HLA-EP13747 358 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 NTSR1P30989 418 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CTSOP43234 321 aaPredicted RBP14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 DGKEP52429 567 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 NRLP54845 237 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 HDAC4P56524 1084 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 FUT11Q495W5 492 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 ALFQ53S48 1182 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 EOGTQ5NDL2 527 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 BRMS1LQ5PSV4 323 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 MPP7Q5T2T1 576 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 MBLAC2Q68D91 279 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 DCUN1D2Q6PH85 259 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CCAR2Q8N163 923 aaKnown RBP14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CCDC185Q8N715 623 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 FRMD1Q8N878 549 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 ZNF366Q8N895 744 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 OR52K2Q8NGK3 314 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CCDC26Q8TAB7 109 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CENPIQ92674 756 aaPredicted RBP14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CHP1Q99653 195 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 MTG2Q9H4K7 406 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 MPP6Q9NZW5 540 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 CNOT8Q9UFF9 292 aaKnown RBP14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 PCDHGA2Q9Y5H1 932 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 STON1Q9Y6Q2 735 aa14.28□□□□□ -0.12
TSPAN3-205ENST00000558745 TCRBV21S2A2A0A5A6 115 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 AXIN1O15169 862 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 APBB3O95704 486 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 HOXB2P14652 356 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 MZF1P28698 734 aaPredicted RBP14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 EIF4A3P38919 411 aaKnown RBP14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 PTPN9P43378 593 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 CDH18Q13634 790 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 ZNF234Q14588 700 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 PLEKHA7Q6IQ23 1121 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 SCYL2Q6P3W7 929 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 SARM1Q6SZW1 724 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 CAMKK1Q8N5S9 505 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 MDGA1Q8NFP4 955 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 HMGB4Q8WW32 186 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 RLN3Q8WXF3 142 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 ZNF653Q96CK0 615 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 FAM126AQ9BYI3 521 aaPredicted RBP14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 IRX2Q9BZI1 471 aaPredicted RBP14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 ISCUQ9H1K1 167 aa14.27□□□□□ -0.12
TSPAN3-205ENST00000558745 GPR179Q6PRD1 2367 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 FANCMQ8IYD8 2048 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 TYW5A2RUC4 315 aaKnown RBP14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 FAM72CH0Y354 149 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 PRKCHP24723 683 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 HOXA6P31267 233 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 ADRA1BP35368 520 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 CSKP41240 450 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 ZNF143P52747 638 aaPredicted RBP14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 GFPT1Q06210 699 aaPredicted RBP14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 TBX2Q13207 712 aaPredicted RBP14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 PTPRNQ16849 979 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 RABGAP1LQ5R372 815 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 CCDC122Q5T0U0 273 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 FAM72AQ5TYM5 149 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 SDE2Q6IQ49 451 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 FAM72DQ6L9T8 149 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 PRR23BQ6ZRT6 265 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 STRADAQ7RTN6 431 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 FAM72BQ86X60 149 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 PYROXD2Q8N2H3 581 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 PGBD3Q8N328 593 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 ARFGAP1Q8N6T3 406 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 SUMF1Q8NBK3 374 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 OR8K1Q8NGG5 319 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 KCNV2Q8TDN2 545 aa14.26□□□□□ -0.13
TSPAN3-205ENST00000558745 UCMAQ8WVF2 138 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms