RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NFE2L3Q9Y4A8 694 aa11.96□□□□□ -0.49
CASC4-205ENST00000558735 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.5
CASC4-205ENST00000558735 BECN2A8MW95 431 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 IRAK2O43187 625 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 DKK1O94907 266 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 ATP5BP06576 529 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 POLR2EP19388 210 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 ACSL1P33121 698 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 RPS14P62263 151 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 EIF4EBP2Q13542 120 aaPredicted RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 FNDC3BQ53EP0 1204 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 FSCBQ5H9T9 825 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 MS4A13Q5J8X5 152 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 DCAF12L1Q5VU92 463 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 BEND5Q7L4P6 421 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 FAM124AQ86V42 546 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 CACUL1Q86Y37 369 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 CREBRFQ8IUR6 639 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 NAXDQ8IW45 347 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 CFAP52Q8N1V2 620 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 ADAM32Q8TC27 787 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 GOLGA1Q92805 767 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 MYO19Q96H55 970 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 PRICKLE1Q96MT3 831 aaPredicted RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 CAMK1GQ96NX5 476 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 BBC3Q96PG8 261 aaPredicted RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 NUCKS1Q9H1E3 243 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 MTG2Q9H4K7 406 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 SUSD2Q9UGT4 822 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 SUN2Q9UH99 717 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 EIF2B4Q9UI10 523 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
CASC4-205ENST00000558735 CFAP46Q8IYW2 2715 aa11.95□□□□□ -0.5
CASC4-205ENST00000558735 A0A1B0GTW7 788 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 E5RJQ4 531 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 SART1O43290 800 aaKnown RBP11.94□□□□□ -0.5
CASC4-205ENST00000558735 THAP12O43422 761 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 MED7O43513 233 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 ZNF883P0CG24 379 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 YWHAZP63104 245 aaKnown RBP11.94□□□□□ -0.5
CASC4-205ENST00000558735 PITX1P78337 314 aaPredicted RBP11.94□□□□□ -0.5
CASC4-205ENST00000558735 BNC1Q01954 994 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 GRIK2Q13002 908 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 NNTQ13423 1086 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 TAF5Q15542 800 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 MEA1Q16626 185 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 ARHGAP44Q17R89 818 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 DCAF6Q58WW2 860 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 ZC3H12AQ5D1E8 599 aaKnown RBP11.94□□□□□ -0.5
CASC4-205ENST00000558735 TRIM65Q6PJ69 517 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 DBX2Q6ZNG2 339 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 MMS22LQ6ZRQ5 1243 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 ENOSF1Q7L5Y1 443 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 TAC4Q86UU9 113 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 MFN1Q8IWA4 741 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 MRGPRX3Q96LB0 322 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 SERPINB11Q96P15 392 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 DDX50Q9BQ39 737 aaKnown RBP11.94□□□□□ -0.5
CASC4-205ENST00000558735 MIR1-1HGQ9H1L0 117 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 LHX5Q9H2C1 402 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 THAP9Q9H5L6 903 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 C6orf106Q9H6K1 298 aaPredicted RBP11.94□□□□□ -0.5
CASC4-205ENST00000558735 TJP2Q9UDY2 1190 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 PCOLCE2Q9UKZ9 415 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 PCDHB9Q9Y5E1 797 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 SLCO1B1Q9Y6L6 691 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 KNL1Q8NG31 2342 aa11.94□□□□□ -0.5
CASC4-205ENST00000558735 NUMA1Q14980 2115 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 CKAP5Q14008 2032 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 MEI4A8MW99 385 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 CAPN9O14815 690 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 BCAT2O15382 392 aaPredicted RBP11.93□□□□□ -0.5
CASC4-205ENST00000558735 TRUB2O95900 331 aaKnown RBP11.93□□□□□ -0.5
CASC4-205ENST00000558735 MOCS2O96007 188 aaPredicted RBP11.93□□□□□ -0.5
CASC4-205ENST00000558735 IGLV3-25P01717 112 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 PON1P27169 355 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 GNA15P30679 374 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 CSKP41240 450 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 UBE2HP62256 183 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 GBP6Q6ZN66 633 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 TMPRSS7Q7RTY8 843 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 SLCO6A1Q86UG4 719 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 CARNMT1Q8N4J0 409 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 ZCCHC9Q8N567 271 aaKnown RBP11.93□□□□□ -0.5
CASC4-205ENST00000558735 ZNF557Q8N988 423 aaPredicted RBP11.93□□□□□ -0.5
CASC4-205ENST00000558735 HJURPQ8NCD3 748 aaPredicted RBP11.93□□□□□ -0.5
CASC4-205ENST00000558735 BAHD1Q8TBE0 780 aaPredicted RBP11.93□□□□□ -0.5
CASC4-205ENST00000558735 SHC3Q92529 594 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 PCED1AQ9H1Q7 454 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 POPDC2Q9HBU9 364 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 SIX2Q9NPC8 291 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 APEX2Q9UBZ4 518 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 PLXNB3Q9ULL4 1909 aa11.93□□□□□ -0.5
CASC4-205ENST00000558735 A0A087WV48 116 aa11.92□□□□□ -0.5
CASC4-205ENST00000558735 KCNU1A8MYU2 1149 aa11.92□□□□□ -0.5
CASC4-205ENST00000558735 FOXN3O00409 490 aaPredicted RBP11.92□□□□□ -0.5
CASC4-205ENST00000558735 USP8P40818 1118 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms