RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 PRDM16Q9HAZ2 1276 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 CAPN10Q9HC96 672 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 TMEM74BQ9NUR3 256 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 ELOVL2Q9NXB9 296 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 USP36Q9P275 1121 aaKnown RBP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 SFMBT1Q9UHJ3 866 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 STOML2Q9UJZ1 356 aa8.39□□□□□ -1.07
TRAF3-205ENST00000558700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRAF3-205ENST00000558700 CHD8Q9HCK8 2581 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 MAP1BP46821 2468 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 IRAK2O43187 625 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 TIMM44O43615 452 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 TSPAN3O60637 253 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 RECKO95980 971 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 IGLV3-27P01718 113 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 EPHX1P07099 455 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 PABPC1P11940 636 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 NCAM1P13591 858 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 KRT5P13647 590 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 BMP6P22004 513 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 OXTRP30559 389 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 ACADSBP45954 432 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 TBX4P57082 545 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 NNTQ13423 1086 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 FNDC3BQ53EP0 1204 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 MPP7Q5T2T1 576 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 ADGRF1Q5T601 910 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 PMF1Q6P1K2 205 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 CHST9Q7L1S5 443 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 ENOSF1Q7L5Y1 443 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 ARHGEF19Q8IW93 802 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 MINDY1Q8N5J2 469 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 DEFB119Q8N690 84 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 HJURPQ8NCD3 748 aaPredicted RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 EHBP1Q8NDI1 1231 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 OR2T3Q8NH03 318 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 LMO3Q8TAP4 145 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 SREK1Q8WXA9 508 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 KAT5Q92993 513 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 TMA16Q96EY4 203 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 SIPA1Q96FS4 1042 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 P2RY11Q96G91 374 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 FAM81BQ96LP2 452 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 DMRTB1Q96MA1 342 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 DDX50Q9BQ39 737 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 MKRN2Q9H000 416 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 INTS2Q9H0H0 1204 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 SLC6A17Q9H1V8 727 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 CD93Q9NPY3 652 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 ST7Q9NRC1 585 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 ABCB8Q9NUT2 735 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 GGA2Q9UJY4 613 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 NFE2L3Q9Y4A8 694 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 LAMA1P25391 3075 aa8.38□□□□□ -1.07
TRAF3-205ENST00000558700 ASCC3Q8N3C0 2202 aaKnown RBP8.38□□□□□ -1.07
TRAF3-205ENST00000558700 CACNA1EQ15878 2313 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 KMT2BQ9UMN6 2715 aaPredicted RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 UPK3BL1B0FP48 263 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 WASH3PC4AMC7 463 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 UPK3BL2E5RIL1 263 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 PIK3R2O00459 728 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 GIPC1O14908 333 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 MED7O43513 233 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 ACSL4O60488 711 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 OPHN1O60890 802 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 IGLV3-19P01714 112 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 APOEP02649 317 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 ATP5BP06576 529 aaKnown RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 HLA-FP30511 346 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 TPMTP51580 245 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 STX17P56962 302 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 FOXC1Q12948 553 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 PLEKHG6Q3KR16 790 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 TTC31Q49AM3 519 aaPredicted RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 RRAGAQ7L523 313 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 CACUL1Q86Y37 369 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 MFN1Q8IWA4 741 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 CCDC117Q8IWD4 279 aaPredicted RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 DEFB124Q8NES8 71 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 CADM4Q8NFZ8 388 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 DQX1Q8TE96 717 aaKnown RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 SORCS1Q8WY21 1168 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 FAM149B1Q96BN6 582 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 TOE1Q96GM8 510 aaKnown RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 ZNF419Q96HQ0 510 aaPredicted RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 ZSWIM1Q9BR11 485 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 ZDHHC5Q9C0B5 715 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 MIS12Q9H081 205 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 PCED1AQ9H1Q7 454 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 LHX5Q9H2C1 402 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 WSB2Q9NYS7 404 aaPredicted RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 STIM2Q9P246 746 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 CLEC4EQ9ULY5 219 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 PLA2G4CQ9UP65 541 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 CNTN6Q9UQ52 1028 aa8.37□□□□□ -1.07
TRAF3-205ENST00000558700 TP53BP1Q12888 1972 aaPredicted RBP8.37□□□□□ -1.07
TRAF3-205ENST00000558700 A0A1B0GTW7 788 aa8.36□□□□□ -1.07
TRAF3-205ENST00000558700 RNF225M0QZC1 329 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms