RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ZNF572Q7Z3I7 529 aaPredicted RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 FAM217AQ8IXS0 508 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 YAF2Q8IY57 180 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 HJURPQ8NCD3 748 aaPredicted RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 BPIFB1Q8TDL5 484 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 GRK7Q8WTQ7 553 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 COG1Q8WTW3 980 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 USP13Q92995 863 aaPredicted RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 ASB16Q96NS5 453 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 HAUS2Q9NVX0 235 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
TPM1-209ENST00000558072 CWC15Q9P013 229 aaKnown RBP12.79□□□□□ -0.36
TPM1-209ENST00000558072 A0A1B0GVM2 712 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 CFAP69A5D8W1 941 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 TCAF2A6NFQ2 919 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 HACD1B0YJ81 288 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 PPP1R12AO14974 1030 aaPredicted RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 MCF2LO15068 1137 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 MTSS1O43312 755 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 GOT1P17174 413 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 CHRNA3P32297 505 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 IFNAR2P48551 515 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 YBEYP58557 167 aaPredicted RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 ZXDBP98169 803 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 DPYSQ14117 519 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 PAFAH1B3Q15102 231 aaKnown RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 PDK1Q15118 436 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 ZNF77Q15935 545 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 PREPLQ4J6C6 727 aaPredicted RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 C6orf118Q5T5N4 469 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 PIK3R6Q5UE93 754 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 RAP1GAP2Q684P5 730 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 DRICH1Q6PGQ1 229 aaPredicted RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 ZNF783Q6ZMS7 281 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 MAATS1Q7Z4T9 603 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 LGI2Q8N0V4 545 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 RTL3Q8N8U3 475 aaKnown RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 CCDC26Q8TAB7 109 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 SUSD6Q92537 303 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 EXOC4Q96A65 974 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 ELSPBP1Q96BH3 223 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 RSPRY1Q96DX4 576 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 TMA16Q96EY4 203 aaKnown RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 PRMT1Q99873 361 aaKnown RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 TMPRSS4Q9NRS4 437 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 TMEM248Q9NWD8 314 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 EPS15L1Q9UBC2 864 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 VANGL2Q9ULK5 521 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 CCL26Q9Y258 94 aa12.78□□□□□ -0.36
TPM1-209ENST00000558072 NUP210Q8TEM1 1887 aaPredicted RBP12.78□□□□□ -0.36
TPM1-209ENST00000558072 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 NDC80O14777 642 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 ECI2O75521 394 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 NFATC1O95644 943 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 ADH1CP00326 375 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 LAMP2P13473 410 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 ERCC2P18074 760 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 IL4RP24394 825 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 STIP1P31948 543 aaKnown RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 FNTAP49354 379 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 NDST2P52849 883 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 KLF1Q13351 362 aaPredicted RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 ZNF177Q13360 481 aaPredicted RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 SLC12A1Q13621 1099 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 E2F5Q15329 346 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 CA9Q16790 459 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 AAK1Q2M2I8 961 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 GLE1Q53GS7 698 aaKnown RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 TMCO4Q5TGY1 634 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 FBXL22Q6P050 247 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 SETD3Q86TU7 594 aaPredicted RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 PYROXD2Q8N2H3 581 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 TDRD5Q8NAT2 981 aaKnown RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 CCHCR1Q8TD31 782 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 ATP2A3Q93084 1043 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 HEMGNQ9BXL5 484 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 ARHGEF4Q9NR80 690 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 DRG1Q9Y295 367 aaKnown RBP12.77□□□□□ -0.37
TPM1-209ENST00000558072 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.37
TPM1-209ENST00000558072 DOCK8Q8NF50 2099 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 CXorf51AA0A1B0GTR3 108 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 ARHGAP42A6NI28 874 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 DCLK1O15075 740 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 ZNF185O15231 689 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 FANCGO15287 622 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 SLU7O95391 586 aaKnown RBP12.76□□□□□ -0.37
TPM1-209ENST00000558072 KLKB1P03952 638 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 CD48P09326 243 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 KRT10P13645 584 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 ACTN2P35609 894 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 GGCXP38435 758 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 CYP1B1Q16678 543 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 LEXMQ3ZCV2 418 aa12.76□□□□□ -0.37
TPM1-209ENST00000558072 PARP15Q460N3 678 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms